RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 MYO15BQ96JP2 1530 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 A0A087WV62 115 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 F5H423 210 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 HNRNPDLO14979 420 aaKnown RBP5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 ARP10275 920 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 EGR1P18146 543 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 EPHA3P29320 983 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 GATMP50440 423 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 SIM1P81133 766 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 RAB30Q15771 203 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 TMTC4Q5T4D3 741 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 USP17L6PQ6QN14 398 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 CAND1Q86VP6 1230 aaKnown RBP5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 CCDC28AQ8IWP9 274 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 GPR150Q8NGU9 434 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 ACTRT2Q8TDY3 377 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 POF1BQ8WVV4 589 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 CTHRC1Q96CG8 243 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 ZDHHC12Q96GR4 267 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 HAPLN3Q96S86 360 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 VN1R3Q9BXE9 311 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 ZBTB26Q9HCK0 441 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 IGSF9Q9P2J2 1179 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 LRIT1Q9P2V4 623 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 DNAJB11Q9UBS4 358 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 SLC39A10Q9ULF5 831 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 SH2B3Q9UQQ2 575 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 LRCH1Q9Y2L9 728 aa5.37□□□□□ -1.55
HMGB3P6-201ENST00000444896 POLR2AP24928 1970 aaKnown RBP5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 A0A087X1B8 175 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 OR2W5A6NFC9 320 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 LINC00473A8K010 186 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 PODXLO00592 558 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 MGST3O14880 152 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 ONECUT2O95948 504 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 LMNAP02545 664 aaKnown RBP5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 SLPIP03973 132 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 PECAM1P16284 738 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 ALDH9A1P49189 494 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 RARRES1P49788 294 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 TNFAIP2Q03169 654 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 MAPKAPK3Q16644 382 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 CYP1B1Q16678 543 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 TUBB8Q3ZCM7 444 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 FAM83BQ5T0W9 1011 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 TEDDM1Q5T9Z0 273 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 MZT2AQ6P582 158 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 METTL25Q8N6Q8 603 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 RSPRY1Q96DX4 576 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 ZNF668Q96K58 619 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 HIST1H2AAQ96QV6 131 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 SLC25A32Q9H2D1 315 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 NECTIN3Q9NQS3 549 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 ARHGEF3Q9NR81 526 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 DLL3Q9NYJ7 618 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 RIMKLBQ9ULI2 386 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 GABRQQ9UN88 632 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 USP22Q9UPT9 525 aa5.36□□□□□ -1.55
HMGB3P6-201ENST00000444896 FNDC1Q4ZHG4 1894 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 COL15A1P39059 1388 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 COQ9O75208 318 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 RHOBTB3O94955 611 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 NXPH3O95157 252 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 MST1P26927 711 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 ITPKBP27987 946 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 HTR7P34969 479 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 COL10A1Q03692 680 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 DPTQ07507 201 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 STARD3Q14849 445 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 KRT72Q14CN4 511 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 SLC5A9Q2M3M2 681 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 ARHGAP15Q53QZ3 475 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 FAXCQ5TGI0 409 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 ABLIM2Q6H8Q1 611 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 MRNIPQ6NTE8 343 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 FBXO38Q6PIJ6 1188 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 DPY19L3Q6ZPD9 716 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 ZNF551Q7Z340 670 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 KRT73Q86Y46 540 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 C11orf44Q8N8P7 122 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 IPO4Q8TEX9 1081 aaKnown RBP5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 XAGE5Q8WWM1 108 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 SLC9A6Q92581 669 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 CHFRQ96EP1 664 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 INO80BQ9C086 356 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 PTPRHQ9HD43 1115 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 SLC27A6Q9Y2P4 619 aa5.35□□□□□ -1.55
HMGB3P6-201ENST00000444896 CCDC151A5D8V7 595 aa5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 GOLGA6L3A6NEY3 463 aa5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 EXOC5O00471 708 aa5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 FFAR2O15552 330 aa5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 URI1O94763 535 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 CTGFP29279 349 aa5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 PDIA3P30101 505 aaKnown RBP5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 SLC5A2P31639 672 aa5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 GALNT1Q10472 559 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 PUM3Q15397 648 aaKnown RBP5.34□□□□□ -1.55
HMGB3P6-201ENST00000444896 GGT6Q6P531 493 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms