RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 AP1ARQ63HQ0 302 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 LPCAT1Q8NF37 534 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 B4GALNT2Q8NHY0 566 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 RIN3Q8TB24 985 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 FHDC1Q9C0D6 1143 aaPredicted RBP8.29□□□□□ -1.08
RIF1-205ENST00000444746 WDR35Q9P2L0 1181 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 FARP1Q9Y4F1 1045 aaPredicted RBP8.29□□□□□ -1.08
RIF1-205ENST00000444746 HNRNPCL2B2RXH8 293 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 HNRNPCL1O60812 293 aaKnown RBP8.29□□□□□ -1.08
RIF1-205ENST00000444746 LMNAP02545 664 aaKnown RBP8.29□□□□□ -1.08
RIF1-205ENST00000444746 LTFP02788 710 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 USP17L7P0C7H9 530 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 ATP6V1B1P15313 513 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 HARS2P49590 506 aaKnown RBP8.29□□□□□ -1.08
RIF1-205ENST00000444746 SARSP49591 514 aaKnown RBP8.29□□□□□ -1.08
RIF1-205ENST00000444746 ST8SIA6P61647 398 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 NR1H3Q13133 447 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 MMRN1Q13201 1228 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 PDK1Q15118 436 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 TREML2Q5T2D2 321 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 MTDHQ86UE4 582 aaKnown RBP8.29□□□□□ -1.08
RIF1-205ENST00000444746 MCOLN2Q8IZK6 566 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 HAS1Q92839 578 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 CATSPER2Q96P56 530 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 DNPEPQ9ULA0 475 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 CDYLQ9Y232 598 aa8.29□□□□□ -1.08
RIF1-205ENST00000444746 ERI2A8K979 691 aaKnown RBP8.28□□□□□ -1.08
RIF1-205ENST00000444746 CLDN5O00501 218 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 CHUKO15111 745 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 ASS1P00966 412 aaKnown RBP8.28□□□□□ -1.08
RIF1-205ENST00000444746 VDRP11473 427 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 TSPAN8P19075 237 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 MAP4P27816 1152 aaKnown RBP8.28□□□□□ -1.08
RIF1-205ENST00000444746 ALDH7A1P49419 539 aaKnown RBP8.28□□□□□ -1.08
RIF1-205ENST00000444746 MAPK10P53779 464 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 PTPN11Q06124 597 aaPredicted RBP8.28□□□□□ -1.08
RIF1-205ENST00000444746 TTC23LQ6PF05 361 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 SLFN11Q7Z7L1 901 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 SLC2A14Q8TDB8 520 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 LSM7Q9UK45 103 aaKnown RBP8.28□□□□□ -1.08
RIF1-205ENST00000444746 TTLL13PA6NNM8 815 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 IRF6O14896 467 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 BDNFP23560 247 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 SCNN1BP51168 640 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 ARHGEF7Q14155 803 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 TMEM119Q4V9L6 283 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 RD3Q7Z3Z2 195 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 DDI1Q8WTU0 396 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 TEKT4Q8WW24 435 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 FAM162AQ96A26 154 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 GLT1D1Q96MS3 346 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 ABCG8Q9H221 673 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 SENP1Q9P0U3 644 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 CRLS1Q9UJA2 301 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 LOC102724159A0A0B4J2E5 919 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 NT5C1B-RDH14C9J2C7 533 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 CDH16O75309 829 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 CPSF4O95639 269 aaKnown RBP8.28□□□□□ -1.08
RIF1-205ENST00000444746 SPATA31D3P0C874 917 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 ODC1P11926 461 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 PLK1P53350 603 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 PWP2Q15269 919 aaKnown RBP8.28□□□□□ -1.08
RIF1-205ENST00000444746 PGS1Q32NB8 556 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 SLC39A12Q504Y0 691 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 SPATA31D4Q6ZUB0 917 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 ERO1BQ86YB8 467 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 DEFB106AQ8N104 65 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 ZNF606Q8WXB4 792 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 SLC35C1Q96A29 364 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 ENTPD7Q9NQZ7 604 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 LMTK2Q8IWU2 1503 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 LRG1P02750 347 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 HIST1H2AGP0C0S8 130 aaPredicted RBP8.28□□□□□ -1.08
RIF1-205ENST00000444746 HIST1H2ADP20671 130 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 NFKBIAP25963 317 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 CCL23P55773 120 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 MTHFD1LQ6UB35 978 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 HIST1H2AHQ96KK5 128 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 HIST1H2AJQ99878 128 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 H2AFJQ9BTM1 129 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 STX18Q9P2W9 335 aaKnown RBP8.28□□□□□ -1.08
RIF1-205ENST00000444746 PPP1R11O60927 126 aaPredicted RBP8.28□□□□□ -1.08
RIF1-205ENST00000444746 MFSD10Q14728 455 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 ZC3H12BQ5HYM0 836 aaKnown RBP8.28□□□□□ -1.08
RIF1-205ENST00000444746 ICE2Q659A1 982 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 RBM43Q6ZSC3 357 aaKnown RBP8.28□□□□□ -1.08
RIF1-205ENST00000444746 STRA8Q7Z7C7 330 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 C4orf19Q8IY42 314 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 KCND2Q9NZV8 630 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 E5RJQ4 531 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 PROSCO94903 275 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 NFICP08651 508 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 PTPRAP18433 802 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 CENPCQ03188 943 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 PKN3Q6P5Z2 889 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 KIAA0319LQ8IZA0 1049 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 POU5F2Q8N7G0 328 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 DCLK3Q9C098 648 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 MROH8Q9H579 483 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 IL1RAPL1Q9NZN1 696 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms