RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ZXDBP98169 803 aa24.97■■□□□ 1.59
VARS-217ENST00000440048 TRIM68Q6AZZ1 485 aa24.97■■□□□ 1.59
VARS-217ENST00000440048 ALYREFQ86V81 257 aaKnown RBP24.97■■□□□ 1.59
VARS-217ENST00000440048 FAM3CQ92520 227 aa24.97■■□□□ 1.59
VARS-217ENST00000440048 ATOH1Q92858 354 aaPredicted RBP24.97■■□□□ 1.59
VARS-217ENST00000440048 C8orf33Q9H7E9 229 aaPredicted RBP24.97■■□□□ 1.59
VARS-217ENST00000440048 HPS4Q9NQG7 708 aa24.97■■□□□ 1.59
VARS-217ENST00000440048 PCDHB4Q9Y5E5 795 aa24.97■■□□□ 1.59
VARS-217ENST00000440048 MBD3O95983 291 aa24.96■■□□□ 1.59
VARS-217ENST00000440048 CD19P15391 556 aa24.96■■□□□ 1.59
VARS-217ENST00000440048 PGFP49763 221 aa24.96■■□□□ 1.59
VARS-217ENST00000440048 MRE11P49959 708 aa24.96■■□□□ 1.59
VARS-217ENST00000440048 GCNT1Q02742 428 aa24.96■■□□□ 1.59
VARS-217ENST00000440048 ITPRIPL2Q3MIP1 535 aa24.96■■□□□ 1.59
VARS-217ENST00000440048 SGO2Q562F6 1265 aa24.96■■□□□ 1.59
VARS-217ENST00000440048 CT47A1Q5JQC4 288 aaPredicted RBP24.96■■□□□ 1.59
VARS-217ENST00000440048 HECTD3Q5T447 861 aa24.96■■□□□ 1.59
VARS-217ENST00000440048 TMEM270Q6UE05 265 aa24.96■■□□□ 1.59
VARS-217ENST00000440048 ZNF687Q8N1G0 1237 aa24.96■■□□□ 1.59
VARS-217ENST00000440048 ANKRD52Q8NB46 1076 aa24.96■■□□□ 1.59
VARS-217ENST00000440048 MSANTD3Q96H12 275 aa24.96■■□□□ 1.59
VARS-217ENST00000440048 CRACR2AQ9BSW2 395 aa24.96■■□□□ 1.59
VARS-217ENST00000440048 EBF3Q9H4W6 596 aa24.96■■□□□ 1.59
VARS-217ENST00000440048 NDRG2Q9UN36 371 aaKnown RBP24.96■■□□□ 1.59
VARS-217ENST00000440048 SCML2Q9UQR0 700 aa24.96■■□□□ 1.59
VARS-217ENST00000440048 CPQQ9Y646 472 aa24.96■■□□□ 1.59
VARS-217ENST00000440048 LEFTY2O00292 366 aa24.95■■□□□ 1.58
VARS-217ENST00000440048 VDRP11473 427 aa24.95■■□□□ 1.58
VARS-217ENST00000440048 CTHP32929 405 aa24.95■■□□□ 1.58
VARS-217ENST00000440048 KIF11P52732 1056 aa24.95■■□□□ 1.58
VARS-217ENST00000440048 RUNX3Q13761 415 aa24.95■■□□□ 1.58
VARS-217ENST00000440048 PDGFRLQ15198 375 aa24.95■■□□□ 1.58
VARS-217ENST00000440048 GOLGA7BQ2TAP0 167 aa24.95■■□□□ 1.58
VARS-217ENST00000440048 TTC30AQ86WT1 665 aa24.95■■□□□ 1.58
VARS-217ENST00000440048 FAM114A1Q8IWE2 563 aa24.95■■□□□ 1.58
VARS-217ENST00000440048 KREMEN1Q96MU8 473 aa24.95■■□□□ 1.58
VARS-217ENST00000440048 CCSER2Q9H7U1 834 aa24.95■■□□□ 1.58
VARS-217ENST00000440048 SMPD4Q9NXE4 827 aa24.95■■□□□ 1.58
VARS-217ENST00000440048 KIAA1257Q9ULG3 409 aa24.95■■□□□ 1.58
VARS-217ENST00000440048 CACNA1IQ9P0X4 2223 aa24.95■■□□□ 1.58
VARS-217ENST00000440048 RIF1Q5UIP0 2472 aaKnown RBP24.95■■□□□ 1.58
VARS-217ENST00000440048 SPECC1L-ADORA2AF8WAN1 911 aa24.94■■□□□ 1.58
VARS-217ENST00000440048 H0Y858 1186 aa24.94■■□□□ 1.58
VARS-217ENST00000440048 RNF225M0QZC1 329 aaPredicted RBP24.94■■□□□ 1.58
VARS-217ENST00000440048 CYP26A1O43174 497 aa24.94■■□□□ 1.58
VARS-217ENST00000440048 COCHO43405 550 aa24.94■■□□□ 1.58
VARS-217ENST00000440048 PAEPP09466 180 aa24.94■■□□□ 1.58
VARS-217ENST00000440048 MBL2P11226 248 aaPredicted RBP24.94■■□□□ 1.58
VARS-217ENST00000440048 ARSAP15289 507 aa24.94■■□□□ 1.58
VARS-217ENST00000440048 TUBP50607 506 aa24.94■■□□□ 1.58
VARS-217ENST00000440048 FZD5Q13467 585 aa24.94■■□□□ 1.58
VARS-217ENST00000440048 RALGPS2Q86X27 583 aaPredicted RBP24.94■■□□□ 1.58
VARS-217ENST00000440048 OSCP1Q8WVF1 389 aa24.94■■□□□ 1.58
VARS-217ENST00000440048 CLDN23Q96B33 292 aa24.94■■□□□ 1.58
VARS-217ENST00000440048 UBXN6Q9BZV1 441 aa24.94■■□□□ 1.58
VARS-217ENST00000440048 TLR8Q9NR97 1041 aaKnown RBP24.94■■□□□ 1.58
VARS-217ENST00000440048 DUS2Q9NX74 493 aaKnown RBP24.94■■□□□ 1.58
VARS-217ENST00000440048 TSPAN16Q9UKR8 245 aa24.94■■□□□ 1.58
VARS-217ENST00000440048 WNT6Q9Y6F9 365 aa24.94■■□□□ 1.58
VARS-217ENST00000440048 OTOL1A6NHN0 477 aaPredicted RBP24.93■■□□□ 1.58
VARS-217ENST00000440048 NCAM2O15394 837 aa24.93■■□□□ 1.58
VARS-217ENST00000440048 MAN2A1Q16706 1144 aa24.93■■□□□ 1.58
VARS-217ENST00000440048 HSP90AA4PQ58FG1 418 aa24.93■■□□□ 1.58
VARS-217ENST00000440048 C1orf228Q6PIY5 440 aa24.93■■□□□ 1.58
VARS-217ENST00000440048 TXNDC11Q6PKC3 985 aa24.93■■□□□ 1.58
VARS-217ENST00000440048 GBP6Q6ZN66 633 aa24.93■■□□□ 1.58
VARS-217ENST00000440048 PIGZQ86VD9 579 aa24.93■■□□□ 1.58
VARS-217ENST00000440048 TFAP2BQ92481 460 aa24.93■■□□□ 1.58
VARS-217ENST00000440048 UBE2TQ9NPD8 197 aaPredicted RBP24.93■■□□□ 1.58
VARS-217ENST00000440048 USP3Q9Y6I4 520 aa24.93■■□□□ 1.58
VARS-217ENST00000440048 O00370 1275 aa24.92■■□□□ 1.58
VARS-217ENST00000440048 SLC9A1P19634 815 aa24.92■■□□□ 1.58
VARS-217ENST00000440048 IFNAR2P48551 515 aa24.92■■□□□ 1.58
VARS-217ENST00000440048 SLC8A3P57103 927 aa24.92■■□□□ 1.58
VARS-217ENST00000440048 CCDC183Q5T5S1 534 aa24.92■■□□□ 1.58
VARS-217ENST00000440048 TRIM65Q6PJ69 517 aa24.92■■□□□ 1.58
VARS-217ENST00000440048 RBBP8NLQ8NC74 664 aaPredicted RBP24.92■■□□□ 1.58
VARS-217ENST00000440048 NMUR1Q9HB89 426 aa24.92■■□□□ 1.58
VARS-217ENST00000440048 SAMSN1Q9NSI8 373 aaKnown RBP24.92■■□□□ 1.58
VARS-217ENST00000440048 HESX1Q9UBX0 185 aa24.92■■□□□ 1.58
VARS-217ENST00000440048 PTPRZ1P23471 2315 aaPredicted RBP24.91■■□□□ 1.58
VARS-217ENST00000440048 GTPBP10A4D1E9 387 aaKnown RBP24.91■■□□□ 1.58
VARS-217ENST00000440048 TULP2O00295 520 aa24.91■■□□□ 1.58
VARS-217ENST00000440048 TLR5O60602 858 aa24.91■■□□□ 1.58
VARS-217ENST00000440048 MAGEA9P43362 315 aa24.91■■□□□ 1.58
VARS-217ENST00000440048 RPS9P46781 194 aaKnown RBP24.91■■□□□ 1.58
VARS-217ENST00000440048 ZNF132P52740 706 aa24.91■■□□□ 1.58
VARS-217ENST00000440048 BCAT1P54687 386 aa24.91■■□□□ 1.58
VARS-217ENST00000440048 PDE4CQ08493 712 aa24.91■■□□□ 1.58
VARS-217ENST00000440048 ANGPT1Q15389 498 aa24.91■■□□□ 1.58
VARS-217ENST00000440048 EXOC3L4Q17RC7 722 aa24.91■■□□□ 1.58
VARS-217ENST00000440048 EML3Q32P44 896 aa24.91■■□□□ 1.58
VARS-217ENST00000440048 SASS6Q6UVJ0 657 aa24.91■■□□□ 1.58
VARS-217ENST00000440048 CCDC186Q7Z3E2 898 aa24.91■■□□□ 1.58
VARS-217ENST00000440048 UBA3Q8TBC4 463 aa24.91■■□□□ 1.58
VARS-217ENST00000440048 ENOX1Q8TC92 643 aaKnown RBP24.91■■□□□ 1.58
VARS-217ENST00000440048 ZFRQ96KR1 1074 aaKnown RBP24.91■■□□□ 1.58
VARS-217ENST00000440048 TUBGCP2Q9BSJ2 902 aa24.91■■□□□ 1.58
VARS-217ENST00000440048 LINC00597Q9H2U6 94 aa24.91■■□□□ 1.58
VARS-217ENST00000440048 OSER1Q9NX31 292 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms