RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 PAPPAQ13219 1627 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 ASTN2O75129 1339 aaPredicted RBP9.41□□□□□ -0.9
COPB1-202ENST00000439561 A0A0B4J269 797 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 GOLGA8QA0A0J9YX86 632 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 GOLGA8OA6NCC3 632 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 CAPN8A6NHC0 703 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 GOLGA8NF8WBI6 632 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 H0YIN7 160 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 EXTL3O43909 919 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 PRPSAP2O60256 369 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 UGT1A9O60656 530 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 HSPA4LO95757 839 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 VAV1P15498 845 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 DESP17661 470 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 JAK3P52333 1124 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 MYL6P60660 151 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 DPYSL3Q14195 570 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 PDK3Q15120 406 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 DLGAP5Q15398 846 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 ZNF699Q32M78 642 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 CDHR3Q6ZTQ4 885 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 C15orf52Q6ZUT6 534 aaKnown RBP9.41□□□□□ -0.9
COPB1-202ENST00000439561 IGDCC3Q8IVU1 814 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 TRIML2Q8N7C3 387 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 DCAKDQ8WVC6 231 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 ZNF516Q92618 1163 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 SKA1Q96BD8 255 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 ZDHHC15Q96MV8 337 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 PHF12Q96QT6 1004 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 UGT1A7Q9HAW7 530 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 UGT1A10Q9HAW8 530 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 UGT1A8Q9HAW9 530 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 PREBQ9HCU5 417 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 MAN1C1Q9NR34 630 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 CHCHD3Q9NX63 227 aaKnown RBP9.41□□□□□ -0.9
COPB1-202ENST00000439561 KCNK4Q9NYG8 393 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 ATRNL1Q5VV63 1379 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 SPATA31A5Q5VU36 1347 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 SPATA31A7Q8IWB4 1347 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 SYNJ2BP-COX16A0A087WUM0 186 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 TMEM191CA6NGB0 347 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 POLRMTO00411 1230 aaKnown RBP9.41□□□□□ -0.9
COPB1-202ENST00000439561 IRF6O14896 467 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 XPO1O14980 1071 aaKnown RBP9.41□□□□□ -0.9
COPB1-202ENST00000439561 DCXO43602 365 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 FKBP6O75344 327 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 ITGAVP06756 1048 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 CDKN2BP42772 138 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 RAP1GAPP47736 663 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 BCAR1P56945 870 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 PDE1CQ14123 709 aaPredicted RBP9.41□□□□□ -0.9
COPB1-202ENST00000439561 TCEAL1Q15170 157 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 TAF5Q15542 800 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 CTC1Q2NKJ3 1217 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 ZNF568Q3ZCX4 644 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 HSP90AA5PQ58FG0 334 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 PLEKHA7Q6IQ23 1121 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 RBM44Q6ZP01 1051 aaKnown RBP9.41□□□□□ -0.9
COPB1-202ENST00000439561 FAM160B2Q86V87 743 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 C12orf56Q8IXR9 622 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 MCPH1Q8NEM0 835 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 JOSD2Q8TAC2 188 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 ZFAND2BQ8WV99 257 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 SLC7A3Q8WY07 619 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 MMADHCQ9H3L0 296 aaPredicted RBP9.41□□□□□ -0.9
COPB1-202ENST00000439561 COX16Q9P0S2 106 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 COL20A1Q9P218 1284 aa9.41□□□□□ -0.9
COPB1-202ENST00000439561 NAV1Q8NEY1 1877 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 ENO3P13929 434 aaPredicted RBP9.4□□□□□ -0.9
COPB1-202ENST00000439561 PMLP29590 882 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 SERPINB5P36952 375 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 KRT76Q01546 638 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 OGDHQ02218 1023 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 DLG1Q12959 904 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 PRKG1Q13976 671 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 ACAP1Q15027 740 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 PRKD1Q15139 912 aaPredicted RBP9.4□□□□□ -0.9
COPB1-202ENST00000439561 DBN1Q16643 649 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 SLC5A9Q2M3M2 681 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 FASTKD1Q53R41 847 aaKnown RBP9.4□□□□□ -0.9
COPB1-202ENST00000439561 VWA5B1Q5TIE3 1220 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 HPS6Q86YV9 775 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 PGBD4Q96DM1 585 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 PPP1R16BQ96T49 567 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 PRPF18Q99633 342 aaKnown RBP9.4□□□□□ -0.9
COPB1-202ENST00000439561 APOBEC3GQ9HC16 384 aaKnown RBP9.4□□□□□ -0.9
COPB1-202ENST00000439561 CISHQ9NSE2 258 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 DRG1Q9Y295 367 aaKnown RBP9.4□□□□□ -0.9
COPB1-202ENST00000439561 LAMB1P07942 1786 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 PEX1O43933 1283 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 SORBS2O94875 1100 aaKnown RBP9.4□□□□□ -0.9
COPB1-202ENST00000439561 MAPTP10636 758 aaKnown RBP9.4□□□□□ -0.9
COPB1-202ENST00000439561 SH3BGRP55822 239 aaPredicted RBP9.4□□□□□ -0.9
COPB1-202ENST00000439561 CRADDP78560 199 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 PRKCEQ02156 737 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 TBL3Q12788 808 aaKnown RBP9.4□□□□□ -0.9
COPB1-202ENST00000439561 DGKZQ13574 1117 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 KRT72Q14CN4 511 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 ZACNQ401N2 412 aa9.4□□□□□ -0.9
COPB1-202ENST00000439561 MAP3K21Q5TCX8 1036 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms