RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 BDNFP23560 247 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 LMO2P25791 158 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 ANXA13P27216 316 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 HOXA6P31267 233 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 HOXD13P35453 343 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 GRIK1P39086 918 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 CYP2J2P51589 502 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 PMS1P54277 932 aaKnown RBP9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 MYL5Q02045 173 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 CYP27A1Q02318 531 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 ZNF268Q14587 947 aaPredicted RBP9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 MTF1Q14872 753 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 TPD52L1Q16890 204 aaPredicted RBP9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 KNOP1Q1ED39 458 aaKnown RBP9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 BMT2Q1RMZ1 405 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 ANKRD40Q6AI12 368 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 FAM160A2Q8N612 972 aaPredicted RBP9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 ARL14EPQ8N8R7 260 aaPredicted RBP9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 RIN3Q8TB24 985 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 SPATA18Q8TC71 538 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 ENOX1Q8TC92 643 aaKnown RBP9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 MYLPFQ96A32 169 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 CCDC127Q96BQ5 260 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 CHFRQ96EP1 664 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 TRMT2BQ96GJ1 504 aaKnown RBP9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 FUBP3Q96I24 572 aaKnown RBP eCLIP9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 MYRFLQ96LU7 910 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 FNBP1Q96RU3 617 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 SLC22A12Q96S37 553 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 TSG101Q99816 390 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 P2RY13Q9BPV8 354 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 ECT2Q9H8V3 914 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 KIAA1586Q9HCI6 787 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 FBRSL1Q9HCM7 1045 aaKnown RBP9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 POLR3BQ9NW08 1133 aaPredicted RBP9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 CDH9Q9ULB4 789 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 WNT6Q9Y6F9 365 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 GON4LQ3T8J9 2241 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 KIF26AQ9ULI4 1882 aaPredicted RBP9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 CEP295Q9C0D2 2601 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 UBE4BO95155 1302 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 PTPRJQ12913 1337 aa9.8□□□□□ -0.84
AC011228.1-201ENST00000439027 DNAH14Q0VDD8 3507 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 C2orf78A6NCI8 922 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 CLIC2O15247 247 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 TADA3O75528 432 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 RPP40O75818 363 aaKnown RBP9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 ABL1P00519 1130 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 DRD1P21728 446 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 GJA4P35212 333 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 GNL1P36915 607 aaPredicted RBP9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 MAGEA11P43364 429 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 NR1H3Q13133 447 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 NCAPHQ15003 741 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 MAPRE1Q15691 268 aaKnown RBP9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 CSRP2Q16527 193 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 CFAP221Q4G0U5 840 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 MDH1BQ5I0G3 518 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 NAIF1Q69YI7 327 aaPredicted RBP9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 TTI2Q6NXR4 508 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 FAM171BQ6P995 826 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 PRR23CQ6ZRP0 262 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 NUDT18Q6ZVK8 323 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 DPH6Q7L8W6 267 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 HS2ST1Q7LGA3 356 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 TRAPPC11Q7Z392 1133 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 CACNA2D4Q7Z3S7 1137 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 WDR49Q8IV35 697 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 OR6B3Q8NGW1 331 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 NETO1Q8TDF5 533 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 SH3RF2Q8TEC5 729 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 OSCP1Q8WVF1 389 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 KBTBD7Q8WVZ9 684 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 ATP2A3Q93084 1043 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 DUSP9Q99956 384 aaKnown RBP9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 KCTD10Q9H3F6 313 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 CRTAC1Q9NQ79 661 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 FANCLQ9NW38 375 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 TRPM5Q9NZQ8 1165 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 NFE2L3Q9Y4A8 694 aa9.79□□□□□ -0.84
AC011228.1-201ENST00000439027 MAP1BP46821 2468 aaKnown RBP9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 DENND4CQ5VZ89 1909 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 PDXKO00764 312 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 SLC30A4O14863 429 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 TGFB1I1O43294 461 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 PHACTR2O75167 634 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 WARSP23381 471 aaKnown RBP9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 TNNC1P63316 161 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 TPM4P67936 248 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 LRRC63Q05C16 580 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 TRPC3Q13507 836 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 ZNF77Q15935 545 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 CCDC6Q16204 474 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 SNRNP35Q16560 246 aaKnown RBP9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 FBXO43Q4G163 708 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 AASDHQ4L235 1098 aaPredicted RBP9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 ZCWPW2Q504Y3 356 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 HSP90AA4PQ58FG1 418 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 VSTM1Q6UX27 236 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 DENND5BQ6ZUT9 1274 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms