RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 RPS6KL1Q9Y6S9 549 aa6.94□□□□□ -1.3
CSDE1-205ENST00000438362 NUP188Q5SRE5 1749 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 hCG_1818297A0A087WSY0 165 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 ASB14A6NK59 587 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 C2CD2LO14523 706 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 CYP2C8P10632 490 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 CHRNB2P17787 502 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 RFC1P35251 1148 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-205ENST00000438362 HOXD13P35453 343 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 CASP2P42575 452 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 ACADSBP45954 432 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 CACNA2D1P54289 1103 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 USP10Q14694 798 aaKnown RBP6.93□□□□□ -1.3
CSDE1-205ENST00000438362 OTOAQ7RTW8 1153 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 SAMD7Q7Z3H4 446 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 SETD3Q86TU7 594 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-205ENST00000438362 CCDC117Q8IWD4 279 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-205ENST00000438362 OTUD5Q96G74 571 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 ZNF317Q96PQ6 595 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-205ENST00000438362 EPAS1Q99814 870 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 GLIS2Q9BZE0 524 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-205ENST00000438362 TRIM15Q9C019 465 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 LRRC4CQ9HCJ2 640 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 RPL26L1Q9UNX3 145 aaKnown RBP6.93□□□□□ -1.3
CSDE1-205ENST00000438362 RNF103-CHMP3A0A140T963 221 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 C3orf70A6NLC5 250 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-205ENST00000438362 AP3B1O00203 1094 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 GLRA2P23416 452 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 GRK2P25098 689 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 PTDSS1P48651 473 aaKnown RBP6.93□□□□□ -1.3
CSDE1-205ENST00000438362 MMP14P50281 582 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 CLCN3P51790 818 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 RPL10AP62906 217 aaKnown RBP6.93□□□□□ -1.3
CSDE1-205ENST00000438362 SATB1Q01826 763 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 ACAP1Q15027 740 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 DCAF6Q58WW2 860 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 EFHC1Q5JVL4 640 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 TWF2Q6IBS0 349 aaKnown RBP6.93□□□□□ -1.3
CSDE1-205ENST00000438362 BBS12Q6ZW61 710 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 RNF135Q8IUD6 432 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 RMDN2Q96LZ7 410 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 PORCNQ9H237 461 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 SPC25Q9HBM1 224 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 ERAP1Q9NZ08 941 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 SOX13Q9UN79 622 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 A0A1W2PPM1 405 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 CCDC78A2IDD5 438 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 SIGLEC16A6NMB1 481 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 FOXO6A8MYZ6 492 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 EEF2KO00418 725 aaKnown RBP6.93□□□□□ -1.3
CSDE1-205ENST00000438362 PLA2G6O60733 806 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 PIAS1O75925 651 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 CXCL8P10145 99 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 EEF1B2P24534 225 aaKnown RBP6.93□□□□□ -1.3
CSDE1-205ENST00000438362 PMLP29590 882 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 CDH8P55286 799 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 RTP1P59025 263 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 CCDC15Q0P6D6 951 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 LAMTOR4Q0VGL1 99 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 EMC10Q5UCC4 262 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 ANGEL2Q5VTE6 544 aaKnown RBP6.93□□□□□ -1.3
CSDE1-205ENST00000438362 DENND5BQ6ZUT9 1274 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 ACOT1Q86TX2 421 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 OR5B17Q8NGF7 314 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 TMA16Q96EY4 203 aaKnown RBP6.93□□□□□ -1.3
CSDE1-205ENST00000438362 SIK2Q9H0K1 926 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 AP5M1Q9H0R1 490 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 LRMDAQ9H2I8 198 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 C20orf96Q9NUD7 363 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-205ENST00000438362 LGALS13Q9UHV8 139 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 SLC4A7Q9Y6M7 1214 aa6.93□□□□□ -1.3
CSDE1-205ENST00000438362 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-205ENST00000438362 TMEM191CA6NGB0 347 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 BANF1O75531 89 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 WFS1O76024 890 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 PSMG1O95456 288 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 STAG3L1P0CL83 205 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 RALBP11234 206 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 TGM2P21980 687 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 MMP8P22894 467 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 PTGER2P43116 358 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 HSD17B4P51659 736 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 PTP4A2Q12974 167 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 CYTH1Q15438 398 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 PLEKHA7Q6IQ23 1121 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 POLNQ7Z5Q5 900 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 CCDC33Q8N5R6 958 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 SPDYE1Q8NFV5 336 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-205ENST00000438362 ATP6V1E2Q96A05 226 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 EME1Q96AY2 570 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 DTNBP1Q96EV8 351 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 TBCBQ99426 244 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 ILKAPQ9H0C8 392 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-205ENST00000438362 THAP1Q9NVV9 213 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 DPP3Q9NY33 737 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 KCNK4Q9NYG8 393 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 HACL1Q9UJ83 578 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 DTNAQ9Y4J8 743 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 LAMB4A4D0S4 1761 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 SLIT2O94813 1529 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms