RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 MDH1BQ5I0G3 518 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 SCUBE3Q8IX30 993 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 CNPY3Q9BT09 278 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 KLC2Q9H0B6 622 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 DHX35Q9H5Z1 703 aaKnown RBP17.45■□□□□ 0.38
TTC3-209ENST00000438055 FARP1Q9Y4F1 1045 aaPredicted RBP17.45■□□□□ 0.38
TTC3-209ENST00000438055 TYROBPO43914 113 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 USP2O75604 605 aaPredicted RBP17.45■□□□□ 0.38
TTC3-209ENST00000438055 HMGCRP04035 888 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 RBL1P28749 1068 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 STIP1P31948 543 aaKnown RBP17.45■□□□□ 0.38
TTC3-209ENST00000438055 CPA2P48052 419 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 MXRA7P84157 204 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 OR6B3Q8NGW1 331 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 LHX5Q9H2C1 402 aa17.45■□□□□ 0.38
TTC3-209ENST00000438055 PRMT7Q9NVM4 692 aaPredicted RBP17.45■□□□□ 0.38
TTC3-209ENST00000438055 ADM5C9JUS6 153 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 APOL1O14791 398 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 GAS2O43903 313 aaKnown RBP17.44■□□□□ 0.38
TTC3-209ENST00000438055 KRT37O76014 449 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 LGSNQ5TDP6 509 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 FAM183BPQ6ZVS7 135 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 PPP1R13LQ8WUF5 828 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 FAM172AQ8WUF8 416 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 DCPSQ96C86 337 aaKnown RBP17.44■□□□□ 0.38
TTC3-209ENST00000438055 FAM49AQ9H0Q0 323 aaPredicted RBP17.44■□□□□ 0.38
TTC3-209ENST00000438055 FBXO6Q9NRD1 293 aaPredicted RBP17.44■□□□□ 0.38
TTC3-209ENST00000438055 GYG2O15488 501 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 FAM189A1O60320 539 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 FGFR1P11362 822 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 GRM1Q13255 1194 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 ADGRD1Q6QNK2 874 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.44■□□□□ 0.381e-9■□□□□ 8.5
TTC3-209ENST00000438055 ALKBH8Q96BT7 664 aaKnown RBP17.44■□□□□ 0.38
TTC3-209ENST00000438055 RILPQ96NA2 401 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 NT5C1AQ9BXI3 368 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 A6NJR5 290 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 C3orf70A6NLC5 250 aaPredicted RBP17.44■□□□□ 0.38
TTC3-209ENST00000438055 ENTPD5O75356 428 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 VDRP11473 427 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 ESRRAP11474 423 aaPredicted RBP17.44■□□□□ 0.38
TTC3-209ENST00000438055 SERPINB3P29508 390 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 TTLL4Q14679 1199 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 GLRA4Q5JXX5 417 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 ARMC2Q8NEN0 867 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 CLMNQ96JQ2 1002 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 PEBP4Q96S96 227 aa17.44■□□□□ 0.38
TTC3-209ENST00000438055 MROH9Q5TGP6 573 aa17.43■□□□□ 0.38
TTC3-209ENST00000438055 ANKLE1Q8NAG6 615 aa17.43■□□□□ 0.38
TTC3-209ENST00000438055 C10orf82Q8WW14 230 aa17.43■□□□□ 0.38
TTC3-209ENST00000438055 ACAP3Q96P50 834 aa17.43■□□□□ 0.38
TTC3-209ENST00000438055 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.43■□□□□ 0.38
TTC3-209ENST00000438055 CILPO75339 1184 aa17.43■□□□□ 0.38
TTC3-209ENST00000438055 OSBPP22059 807 aa17.43■□□□□ 0.38
TTC3-209ENST00000438055 MOGSQ13724 837 aa17.43■□□□□ 0.38
TTC3-209ENST00000438055 APBB1IPQ7Z5R6 666 aaPredicted RBP17.43■□□□□ 0.38
TTC3-209ENST00000438055 PTPRN2Q92932 1015 aa17.43■□□□□ 0.38
TTC3-209ENST00000438055 FAM149B1Q96BN6 582 aa17.43■□□□□ 0.38
TTC3-209ENST00000438055 SERAC1Q96JX3 654 aa17.43■□□□□ 0.38
TTC3-209ENST00000438055 PIH1D1Q9NWS0 290 aaKnown RBP17.43■□□□□ 0.38
TTC3-209ENST00000438055 DPP3Q9NY33 737 aa17.43■□□□□ 0.38
TTC3-209ENST00000438055 ERAP1Q9NZ08 941 aa17.43■□□□□ 0.38
TTC3-209ENST00000438055 GPRC5DQ9NZD1 345 aa17.43■□□□□ 0.38
TTC3-209ENST00000438055 SEPT10Q9P0V9 454 aa17.43■□□□□ 0.38
TTC3-209ENST00000438055 ARMCX1Q9P291 453 aa17.43■□□□□ 0.38
TTC3-209ENST00000438055 TNFSF13BQ9Y275 285 aa17.43■□□□□ 0.38
TTC3-209ENST00000438055 ZNF286BP0CG31 522 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 ADORA2BP29275 332 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 CDH5P33151 784 aaPredicted RBP17.42■□□□□ 0.38
TTC3-209ENST00000438055 ZNF143P52747 638 aaPredicted RBP17.42■□□□□ 0.38
TTC3-209ENST00000438055 TNFAIP2Q03169 654 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 MBTD1Q05BQ5 628 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 ANKRD20A2Q5SQ80 823 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 ANKRD20A1Q5TYW2 823 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 CDCA2Q69YH5 1023 aaPredicted RBP17.42■□□□□ 0.38
TTC3-209ENST00000438055 FAM13CQ8NE31 585 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 FNIP1Q8TF40 1166 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 FZD8Q9H461 694 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 PCMTD2Q9NV79 361 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 PAK5Q9P286 719 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 SKAP2O75563 359 aaPredicted RBP17.42■□□□□ 0.38
TTC3-209ENST00000438055 PDGFRBP09619 1106 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 IQCF3P0C7M6 154 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 PTPN7P35236 360 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 RBP5P82980 135 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 MAP1SQ66K74 1059 aaPredicted RBP17.42■□□□□ 0.38
TTC3-209ENST00000438055 ASRGL1Q7L266 308 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 NETO2Q8NC67 525 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 MECRQ9BV79 373 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 TMEM120AQ9BXJ8 343 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 FRMD8P1Q9BZ68 369 aaPredicted RBP17.42■□□□□ 0.38
TTC3-209ENST00000438055 PPARGC1AQ9UBK2 798 aaKnown RBP17.42■□□□□ 0.38
TTC3-209ENST00000438055 EFR3BQ9Y2G0 817 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 ZNFX1Q9P2E3 1918 aaKnown RBP17.42■□□□□ 0.38
TTC3-209ENST00000438055 TM9SF1O15321 606 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 MYL2P10916 166 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 CCNB1P14635 433 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 SKIV2L2P42285 1042 aaKnown RBP17.42■□□□□ 0.38
TTC3-209ENST00000438055 GPD2P43304 727 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 FAM47CQ5HY64 1035 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms