RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 TFE3P19532 575 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-209ENST00000437951 ZNF467Q7Z7K2 595 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-209ENST00000437951 TDRD5Q8NAT2 981 aaKnown RBP11.9□□□□□ -0.5
PTCH1-209ENST00000437951 MYLPFQ96A32 169 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 FAM213AQ9BRX8 229 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 RPS6KB2Q9UBS0 482 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 ASAP1Q9ULH1 1129 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 A0A0X1KG70 313 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 ZBTB5O15062 677 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 UBOX5O94941 541 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 CPA2P48052 419 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 SWT1Q5T5J6 900 aaKnown RBP11.9□□□□□ -0.5
PTCH1-209ENST00000437951 BTBD8Q5XKL5 378 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 DENND1BQ6P3S1 775 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 RASSF6Q6ZTQ3 369 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 C8orf59Q8N0T1 100 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-209ENST00000437951 C7orf25Q9BPX7 421 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 CHCHD6Q9BRQ6 235 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 JMJD4Q9H9V9 463 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 TEX33O43247 280 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 BMP10O95393 424 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 CHRNDQ07001 517 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 MTMR1Q13613 665 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 PTRHD1Q6GMV3 140 aaKnown RBP11.9□□□□□ -0.5
PTCH1-209ENST00000437951 ADHFE1Q8IWW8 467 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 TRPM5Q9NZQ8 1165 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 ABCB11O95342 1321 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 ALOX15P16050 662 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-209ENST00000437951 AKT1P31749 480 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 RFC5P40937 340 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 EIF2S3P41091 472 aaKnown RBP11.9□□□□□ -0.5
PTCH1-209ENST00000437951 SULT1E1P49888 294 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 GALCP54803 685 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 MYBPC2Q14324 1141 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 UXS1Q8NBZ7 420 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 RBAKQ9NYW8 714 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-209ENST00000437951 L1RE1Q9UN81 338 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 CLTBP09497 229 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 ABRAXAS1Q6UWZ7 409 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 AFG1LQ8WV93 481 aa11.9□□□□□ -0.5
PTCH1-209ENST00000437951 NUP153P49790 1475 aaKnown RBP11.9□□□□□ -0.51
PTCH1-209ENST00000437951 MYO5CQ9NQX4 1742 aa11.9□□□□□ -0.51
PTCH1-209ENST00000437951 ADAMTS12P58397 1594 aa11.9□□□□□ -0.51
PTCH1-209ENST00000437951 ACTRT2Q8TDY3 377 aa11.9□□□□□ -0.51
PTCH1-209ENST00000437951 FAM111AQ96PZ2 611 aa11.9□□□□□ -0.51
PTCH1-209ENST00000437951 MAP3K20Q9NYL2 800 aaKnown RBP11.9□□□□□ -0.51
PTCH1-209ENST00000437951 PI4KBQ9UBF8 816 aa11.9□□□□□ -0.51
PTCH1-209ENST00000437951 TRMT6Q9UJA5 497 aaKnown RBP11.9□□□□□ -0.51
PTCH1-209ENST00000437951 HAT1O14929 419 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 ERFP50548 548 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 CASP5P51878 434 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 OSTNP61366 133 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 NAA20P61599 178 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 ZDHHC13Q8IUH4 622 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 YAF2Q8IY57 180 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 TRMT2AQ8IZ69 625 aaKnown RBP11.89□□□□□ -0.51
PTCH1-209ENST00000437951 ANKS1AQ92625 1134 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 PPP1R10Q96QC0 940 aaKnown RBP11.89□□□□□ -0.51
PTCH1-209ENST00000437951 ADI1Q9BV57 179 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 RAPGEFL1Q9UHV5 662 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 DRG1Q9Y295 367 aaKnown RBP11.89□□□□□ -0.51
PTCH1-209ENST00000437951 AK5Q9Y6K8 562 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 PRLP01236 227 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 S100GP29377 79 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 AQP5P55064 265 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 NEDD8Q15843 81 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 INO80DQ53TQ3 878 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-209ENST00000437951 PJA1Q8NG27 643 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 TFB1MQ8WVM0 346 aaKnown RBP11.89□□□□□ -0.51
PTCH1-209ENST00000437951 ZKSCAN4Q969J2 545 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-209ENST00000437951 C9orf72Q96LT7 481 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 TSEN34Q9BSV6 310 aaKnown RBP11.89□□□□□ -0.51
PTCH1-209ENST00000437951 RACGAP1Q9H0H5 632 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 RNF112Q9ULX5 631 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 TMEM114B3SHH9 223 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 TBC1D12O60347 775 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 SEC24AO95486 1093 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 ARPP19P56211 112 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 PHKG1Q16816 387 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 DEFB107AQ8IZN7 70 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 TSPAN14Q8NG11 270 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 NSMCE2Q96MF7 247 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 NEK6Q9HC98 313 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 AASDHPPTQ9NRN7 309 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 KLHL28Q9NXS3 571 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 SPASTQ9UBP0 616 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 SNX9Q9Y5X1 595 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 V9GYQ6 96 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 WFS1O76024 890 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 CSNK2BP67870 215 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 MACC1Q6ZN28 852 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 ZNF496Q96IT1 587 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-209ENST00000437951 RNPEPL1Q9HAU8 725 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 EFR3BQ9Y2G0 817 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 CNPP09543 421 aaKnown RBP11.89□□□□□ -0.51
PTCH1-209ENST00000437951 PTGS2P35354 604 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 UBP1Q9NZI7 540 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 DENND3A2RUS2 1198 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 H3BNX3 289 aa11.89□□□□□ -0.51
PTCH1-209ENST00000437951 FAUP35544 74 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms