RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 GLIS1Q8NBF1 620 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 DBF4BQ8NFT6 615 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 JOSD2Q8TAC2 188 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 SLC35B2Q8TB61 432 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 NLRP7Q8WX94 980 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 HERVK_113Q902F9 699 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 CCDC77Q9BR77 488 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 FRMD8P1Q9BZ68 369 aaPredicted RBP19.44■□□□□ 0.7
FAM3A-212ENST00000434658 SMYD3Q9H7B4 428 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 CDHR5Q9HBB8 845 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 CTNNAL1Q9UBT7 734 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 CDH16O75309 829 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 CILPO75339 1184 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 LRCH4O75427 683 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 ITGB3P05106 788 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 GHRP10912 638 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 CDH8P55286 799 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 ACTN3Q08043 901 aaPredicted RBP19.44■□□□□ 0.7
FAM3A-212ENST00000434658 ZNF268Q14587 947 aaPredicted RBP19.44■□□□□ 0.7
FAM3A-212ENST00000434658 LPIN1Q14693 890 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 MORF4L2Q15014 288 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 TAZQ16635 292 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 FBXO47Q5MNV8 452 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 CNKSR3Q6P9H4 555 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 PIGWQ7Z7B1 504 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 XYLT1Q86Y38 959 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 RIBC1Q8N443 379 aaPredicted RBP19.44■□□□□ 0.7
FAM3A-212ENST00000434658 ARFGAP1Q8N6T3 406 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 ACSF2Q96CM8 615 aaPredicted RBP19.44■□□□□ 0.7
FAM3A-212ENST00000434658 C9orf72Q96LT7 481 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 CPXM1Q96SM3 734 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 ELOVL4Q9GZR5 314 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 ACTR5Q9H9F9 607 aaPredicted RBP19.44■□□□□ 0.7
FAM3A-212ENST00000434658 PCDH9Q9HC56 1237 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 EURLQ9NYK6 297 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 TJP2Q9UDY2 1190 aa19.44■□□□□ 0.7
FAM3A-212ENST00000434658 TPX2Q9ULW0 747 aaKnown RBP19.44■□□□□ 0.7
FAM3A-212ENST00000434658 A0A087WZ62 844 aa19.43■□□□□ 0.7
FAM3A-212ENST00000434658 TMEM120BA0PK00 339 aa19.43■□□□□ 0.7
FAM3A-212ENST00000434658 GPR32O75388 356 aa19.43■□□□□ 0.7
FAM3A-212ENST00000434658 HADHQ16836 314 aaKnown RBP19.43■□□□□ 0.7
FAM3A-212ENST00000434658 CCDC142Q17RM4 750 aa19.43■□□□□ 0.7
FAM3A-212ENST00000434658 TCTN1Q2MV58 587 aa19.43■□□□□ 0.7
FAM3A-212ENST00000434658 PLEKHG4Q58EX7 1191 aa19.43■□□□□ 0.7
FAM3A-212ENST00000434658 LRRC34Q8IZ02 419 aa19.43■□□□□ 0.7
FAM3A-212ENST00000434658 CCDC197Q8NCU1 140 aa19.43■□□□□ 0.7
FAM3A-212ENST00000434658 TTC25Q96NG3 672 aa19.43■□□□□ 0.7
FAM3A-212ENST00000434658 TWNKQ96RR1 684 aa19.43■□□□□ 0.7
FAM3A-212ENST00000434658 FDXACB1Q9BRP7 624 aaPredicted RBP19.43■□□□□ 0.7
FAM3A-212ENST00000434658 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.43■□□□□ 0.7
FAM3A-212ENST00000434658 CAPN7Q9Y6W3 813 aa19.43■□□□□ 0.7
FAM3A-212ENST00000434658 TET1Q8NFU7 2136 aa19.42■□□□□ 0.7
FAM3A-212ENST00000434658 ZBBXA8MT70 800 aa19.42■□□□□ 0.7
FAM3A-212ENST00000434658 ZSCAN5DPP0CG00 497 aa19.42■□□□□ 0.7
FAM3A-212ENST00000434658 P4HA1P13674 534 aa19.42■□□□□ 0.7
FAM3A-212ENST00000434658 GABRB2P47870 512 aa19.42■□□□□ 0.7
FAM3A-212ENST00000434658 CRYBB1P53674 252 aaPredicted RBP19.42■□□□□ 0.7
FAM3A-212ENST00000434658 GPS1Q13098 491 aa19.42■□□□□ 0.7
FAM3A-212ENST00000434658 LACTB2Q53H82 288 aaPredicted RBP19.42■□□□□ 0.7
FAM3A-212ENST00000434658 CNPY4Q8N129 248 aa19.42■□□□□ 0.7
FAM3A-212ENST00000434658 SEPT8Q92599 483 aa19.42■□□□□ 0.7
FAM3A-212ENST00000434658 TMEM176AQ96HP8 235 aa19.42■□□□□ 0.7
FAM3A-212ENST00000434658 CFAP57Q96MR6 1250 aa19.42■□□□□ 0.7
FAM3A-212ENST00000434658 OSMRQ99650 979 aa19.42■□□□□ 0.7
FAM3A-212ENST00000434658 NSRP1Q9H0G5 558 aaKnown RBP19.42■□□□□ 0.7
FAM3A-212ENST00000434658 MTIF3Q9H2K0 278 aaKnown RBP19.42■□□□□ 0.7
FAM3A-212ENST00000434658 FAM124BQ9H5Z6 455 aaPredicted RBP19.42■□□□□ 0.7
FAM3A-212ENST00000434658 CXXC1Q9P0U4 656 aaPredicted RBP19.42■□□□□ 0.7
FAM3A-212ENST00000434658 HMGXB4Q9UGU5 601 aa19.42■□□□□ 0.7
FAM3A-212ENST00000434658 SHOC2Q9UQ13 582 aa19.42■□□□□ 0.7
FAM3A-212ENST00000434658 ACTL7BQ9Y614 415 aa19.42■□□□□ 0.7
FAM3A-212ENST00000434658 SQORQ9Y6N5 450 aa19.42■□□□□ 0.7
FAM3A-212ENST00000434658 CITO14578 2027 aa19.42■□□□□ 0.7
FAM3A-212ENST00000434658 MICAL2O94851 1124 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 ERBB2P04626 1255 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 IKBKEQ14164 716 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 ITIH4Q14624 930 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 ACAP1Q15027 740 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 SLC10A6Q3KNW5 377 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 HABP4Q5JVS0 413 aaKnown RBP19.41■□□□□ 0.7
FAM3A-212ENST00000434658 RNASEH2BQ5TBB1 312 aaKnown RBP19.41■□□□□ 0.7
FAM3A-212ENST00000434658 BBS12Q6ZW61 710 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 TTC13Q8NBP0 860 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 MCRS1Q96EZ8 462 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 ADAMTS10Q9H324 1103 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 SYNCQ9H7C4 482 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 AGO3Q9H9G7 860 aaKnown RBP19.41■□□□□ 0.7
FAM3A-212ENST00000434658 SAYSD1Q9NPB0 183 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 METTL5Q9NRN9 209 aaKnown RBP19.41■□□□□ 0.7
FAM3A-212ENST00000434658 STAU1O95793 577 aaKnown RBP19.41■□□□□ 0.7
FAM3A-212ENST00000434658 VDRP11473 427 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 ETS1P14921 441 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 PECAM1P16284 738 aaPredicted RBP19.41■□□□□ 0.7
FAM3A-212ENST00000434658 ARF4P18085 180 aaPredicted RBP19.41■□□□□ 0.7
FAM3A-212ENST00000434658 IL1R2P27930 398 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 CDC42EP1Q00587 391 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 RASIP1Q5U651 963 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 TMEM40Q8WWA1 233 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 ZWILCHQ9H900 591 aa19.41■□□□□ 0.7
FAM3A-212ENST00000434658 NAALADL1Q9UQQ1 740 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms