RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 TMEM176AQ96HP8 235 aa16.1■□□□□ 0.17
PTCD1-204ENST00000430982 MYRFLQ96LU7 910 aa16.1■□□□□ 0.17
PTCD1-204ENST00000430982 KCNK16Q96T55 309 aa16.1■□□□□ 0.17
PTCD1-204ENST00000430982 TRPC7Q9HCX4 862 aa16.1■□□□□ 0.17
PTCD1-204ENST00000430982 SEMA4GQ9NTN9 838 aa16.1■□□□□ 0.17
PTCD1-204ENST00000430982 EHD2Q9NZN4 543 aa16.1■□□□□ 0.17
PTCD1-204ENST00000430982 GCNT4Q9P109 453 aa16.1■□□□□ 0.17
PTCD1-204ENST00000430982 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.09■□□□□ 0.17
PTCD1-204ENST00000430982 DPYSL4O14531 572 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 TADA3O75528 432 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 RAD23BP54727 409 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 MAP3K7CLP57077 242 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 SHC2P98077 582 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 GRM2Q14416 872 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 CSRP2Q16527 193 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 TXNDC8Q6A555 127 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 PRR23CQ6ZRP0 262 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 C11orf57Q6ZUT1 292 aaPredicted RBP16.09■□□□□ 0.17
PTCD1-204ENST00000430982 RRAGAQ7L523 313 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 ARHGEF19Q8IW93 802 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 NUP93Q8N1F7 819 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 MAB21L3Q8N8X9 362 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 SLC4A11Q8NBS3 891 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 KAT5Q92993 513 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 JAKMIP2Q96AA8 810 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 HNRNPABQ99729 332 aaKnown RBP16.09■□□□□ 0.17
PTCD1-204ENST00000430982 SMOQ99835 787 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 CRACR2AQ9BSW2 395 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 SLC46A2Q9BY10 475 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 FAM124BQ9H5Z6 455 aaPredicted RBP16.09■□□□□ 0.17
PTCD1-204ENST00000430982 TRPV4Q9HBA0 871 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 SAMSN1Q9NSI8 373 aaKnown RBP16.09■□□□□ 0.17
PTCD1-204ENST00000430982 NFE2L3Q9Y4A8 694 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 PCDHB4Q9Y5E5 795 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 ZZEF1O43149 2961 aa16.09■□□□□ 0.17
PTCD1-204ENST00000430982 HEPACAM2A8MVW5 462 aa16.08■□□□□ 0.16
PTCD1-204ENST00000430982 KCNJ18B7U540 433 aa16.08■□□□□ 0.16
PTCD1-204ENST00000430982 PRKCSHP14314 528 aaPredicted RBP16.08■□□□□ 0.16
PTCD1-204ENST00000430982 DDX6P26196 483 aaKnown RBP eCLIP16.08■□□□□ 0.16
PTCD1-204ENST00000430982 KCNJ12Q14500 433 aa16.08■□□□□ 0.16
PTCD1-204ENST00000430982 MAN2A1Q16706 1144 aa16.08■□□□□ 0.16
PTCD1-204ENST00000430982 PPP1R26Q5T8A7 1209 aaPredicted RBP16.08■□□□□ 0.16
PTCD1-204ENST00000430982 VITQ6UXI7 678 aa16.08■□□□□ 0.16
PTCD1-204ENST00000430982 GBP6Q6ZN66 633 aa16.08■□□□□ 0.16
PTCD1-204ENST00000430982 MON1AQ86VX9 555 aa16.08■□□□□ 0.16
PTCD1-204ENST00000430982 ENOX1Q8TC92 643 aaKnown RBP16.08■□□□□ 0.16
PTCD1-204ENST00000430982 TTLL2Q9BWV7 592 aa16.08■□□□□ 0.16
PTCD1-204ENST00000430982 SMG9Q9H0W8 520 aaKnown RBP16.08■□□□□ 0.16
PTCD1-204ENST00000430982 TRPM5Q9NZQ8 1165 aa16.08■□□□□ 0.16
PTCD1-204ENST00000430982 ZMYM5Q9UJ78 669 aa16.08■□□□□ 0.16
PTCD1-204ENST00000430982 RAB23Q9ULC3 237 aa16.08■□□□□ 0.16
PTCD1-204ENST00000430982 SPEGQ15772 3267 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 PES1O00541 588 aaKnown RBP16.07■□□□□ 0.16
PTCD1-204ENST00000430982 BEST1O76090 585 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 RTN3O95197 1032 aaPredicted RBP16.07■□□□□ 0.16
PTCD1-204ENST00000430982 PRAMEF12O95522 483 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 ABL1P00519 1130 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 CD19P15391 556 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 YWHAQP27348 245 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 AVPR1AP37288 418 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 SLC5A3P53794 718 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 TYRO3Q06418 890 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 TAF10Q12962 218 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 LPAL2Q16609 132 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 TMEM270Q6UE05 265 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 YAF2Q8IY57 180 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 CMTM8Q8IZV2 173 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 UBR7Q8N806 425 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 ZMIZ2Q8NF64 920 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 DEPDC1BQ8WUY9 529 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 DDX1Q92499 740 aaKnown RBP16.07■□□□□ 0.16
PTCD1-204ENST00000430982 FBXO32Q969P5 355 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 E2F7Q96AV8 911 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 RSPRY1Q96DX4 576 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 TUBGCP2Q9BSJ2 902 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 TRMT61BQ9BVS5 477 aaKnown RBP16.07■□□□□ 0.16
PTCD1-204ENST00000430982 BRD9Q9H8M2 597 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 TRPV5Q9NQA5 729 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 ANGPTL2Q9UKU9 493 aa16.07■□□□□ 0.16
PTCD1-204ENST00000430982 ASPMQ8IZT6 3477 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 NCANO14594 1321 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 TRAV19A0A0A6YYK7 116 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 MAN2B1O00754 1011 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 GDF9O60383 454 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 FOXD2O60548 495 aaPredicted RBP16.06■□□□□ 0.16
PTCD1-204ENST00000430982 PSMC3P17980 439 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 ACO1P21399 889 aaKnown RBP16.06■□□□□ 0.16
PTCD1-204ENST00000430982 GDI1P31150 447 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 CCR3P51677 355 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 LIMK1P53667 647 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 GCNT1Q02742 428 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 PPP2R5DQ14738 602 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 EXOC3L4Q17RC7 722 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 VWA3BQ502W6 1294 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 ARHGAP17Q68EM7 881 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 CLEC20AQ6ZU45 233 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 MFSD6LQ8IWD5 586 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 SCAMP5Q8TAC9 235 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 SLITRK1Q96PX8 696 aa16.06■□□□□ 0.16
PTCD1-204ENST00000430982 CSNK1G1Q9HCP0 422 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms