RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	LSM14B	Q9BX40	385 aa	Known RBP	18.84	■□□□□ 0.61
MRPL28-203	ENST00000429738	ECT2	Q9H8V3	914 aa		18.84	■□□□□ 0.61
MRPL28-203	ENST00000429738	DUS2	Q9NX74	493 aa	Known RBP	18.84	■□□□□ 0.61
MRPL28-203	ENST00000429738	MAPK8IP1	Q9UQF2	711 aa		18.84	■□□□□ 0.61
MRPL28-203	ENST00000429738	MYO16	Q9Y6X6	1858 aa		18.84	■□□□□ 0.61
MRPL28-203	ENST00000429738	FAM208B	Q5VWN6	2430 aa		18.83	■□□□□ 0.61
MRPL28-203	ENST00000429738	OAS1	P00973	400 aa	Known RBP	18.83	■□□□□ 0.6
MRPL28-203	ENST00000429738	P4HA1	P13674	534 aa		18.83	■□□□□ 0.6
MRPL28-203	ENST00000429738	GJA4	P35212	333 aa		18.83	■□□□□ 0.6
MRPL28-203	ENST00000429738	ASPA	P45381	313 aa		18.83	■□□□□ 0.6
MRPL28-203	ENST00000429738	SLC7A9	P82251	487 aa		18.83	■□□□□ 0.6
MRPL28-203	ENST00000429738	AMPD2	Q01433	879 aa		18.83	■□□□□ 0.6
MRPL28-203	ENST00000429738	TAF10	Q12962	218 aa		18.83	■□□□□ 0.6
MRPL28-203	ENST00000429738	NUP93	Q8N1F7	819 aa		18.83	■□□□□ 0.6
MRPL28-203	ENST00000429738	KIAA1958	Q8N8K9	716 aa		18.83	■□□□□ 0.6
MRPL28-203	ENST00000429738	RNF38	Q9H0F5	515 aa		18.83	■□□□□ 0.6
MRPL28-203	ENST00000429738	IL37	Q9NZH6	218 aa		18.83	■□□□□ 0.6
MRPL28-203	ENST00000429738	WNT6	Q9Y6F9	365 aa		18.83	■□□□□ 0.6
MRPL28-203	ENST00000429738	KIAA1549L	Q6ZVL6	1849 aa		18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	TNFRSF10B	O14763	440 aa		18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	KCNK5	O95279	499 aa		18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	HLA-DRA	P01903	254 aa		18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	PPP3CA	Q08209	521 aa		18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	SPOPL	Q6IQ16	392 aa		18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	UNC93A	Q86WB7	457 aa		18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	FUK	Q8N0W3	1084 aa		18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	FMR1NB	Q8N0W7	255 aa	Predicted RBP	18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	CRYBG2	Q8N1P7	616 aa		18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	CPA6	Q8N4T0	437 aa		18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	ATP2A3	Q93084	1043 aa		18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	SMARCD1	Q96GM5	515 aa		18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	SLITRK1	Q96PX8	696 aa		18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	KCNK16	Q96T55	309 aa		18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	FBRSL1	Q9HCM7	1045 aa	Known RBP	18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	VPS45	Q9NRW7	570 aa		18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	HMGXB4	Q9UGU5	601 aa		18.82	■□□□□ 0.6
MRPL28-203	ENST00000429738	ATP8B3	O60423	1300 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	EML5	Q05BV3	1969 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	FAM92A	A1XBS5	289 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	LEFTY2	O00292	366 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	RTN3	O95197	1032 aa	Predicted RBP	18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	TRIM49	P0CI25	452 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	TRIM49C	P0CI26	452 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	DRD1	P21728	446 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	RPL13	P26373	211 aa	Known RBP	18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	PSMC2	P35998	433 aa	Known RBP	18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	MPL	P40238	635 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	PIK3CA	P42336	1068 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	IFNAR2	P48551	515 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	GALK1	P51570	392 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	NDST1	P52848	882 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	INCA1	Q0VD86	236 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	BECN1	Q14457	450 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	EDRF1	Q3B7T1	1238 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	PLK5	Q496M5	336 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	NAIF1	Q69YI7	327 aa	Predicted RBP	18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	ACOT1	Q86TX2	421 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	FAM186B	Q8IYM0	893 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	ZMIZ2	Q8NF64	920 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	OVCA2	Q8WZ82	227 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	CCDC34	Q96HJ3	373 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	LINC00597	Q9H2U6	94 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	SMOC1	Q9H4F8	434 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	APOBEC3G	Q9HC16	384 aa	Known RBP	18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	CSNK1G1	Q9HCP0	422 aa		18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	DMAP1	Q9NPF5	467 aa	Predicted RBP	18.81	■□□□□ 0.6
MRPL28-203	ENST00000429738	RNF40	O75150	1001 aa		18.8	■□□□□ 0.6
MRPL28-203	ENST00000429738	EGF	P01133	1207 aa		18.8	■□□□□ 0.6
MRPL28-203	ENST00000429738	YWHAQ	P27348	245 aa		18.8	■□□□□ 0.6
MRPL28-203	ENST00000429738	GCLM	P48507	274 aa		18.8	■□□□□ 0.6
MRPL28-203	ENST00000429738	SLC5A3	P53794	718 aa		18.8	■□□□□ 0.6
MRPL28-203	ENST00000429738	ADAM9	Q13443	819 aa		18.8	■□□□□ 0.6
MRPL28-203	ENST00000429738	PNOC	Q13519	176 aa		18.8	■□□□□ 0.6
MRPL28-203	ENST00000429738	SNX30	Q5VWJ9	437 aa		18.8	■□□□□ 0.6
MRPL28-203	ENST00000429738	RNF43	Q68DV7	783 aa		18.8	■□□□□ 0.6
MRPL28-203	ENST00000429738	SMYD4	Q8IYR2	804 aa	Predicted RBP	18.8	■□□□□ 0.6
MRPL28-203	ENST00000429738	PDZD8	Q8NEN9	1154 aa		18.8	■□□□□ 0.6
MRPL28-203	ENST00000429738	ENGASE	Q8NFI3	743 aa		18.8	■□□□□ 0.6
MRPL28-203	ENST00000429738	TAS1R2	Q8TE23	839 aa		18.8	■□□□□ 0.6
MRPL28-203	ENST00000429738	P2RY13	Q9BPV8	354 aa		18.8	■□□□□ 0.6
MRPL28-203	ENST00000429738	POLR3B	Q9NW08	1133 aa	Predicted RBP	18.8	■□□□□ 0.6
MRPL28-203	ENST00000429738	CPQ	Q9Y646	472 aa		18.8	■□□□□ 0.6
MRPL28-203	ENST00000429738	MYOF	Q9NZM1	2061 aa		18.79	■□□□□ 0.6
MRPL28-203	ENST00000429738	BEST1	O76090	585 aa		18.79	■□□□□ 0.6
MRPL28-203	ENST00000429738	CLSTN1	O94985	981 aa		18.79	■□□□□ 0.6
MRPL28-203	ENST00000429738	ZDHHC11B	P0C7U3	371 aa		18.79	■□□□□ 0.6
MRPL28-203	ENST00000429738	KRT13	P13646	458 aa		18.79	■□□□□ 0.6
MRPL28-203	ENST00000429738	CCDC130	P13994	396 aa		18.79	■□□□□ 0.6
MRPL28-203	ENST00000429738	NUCB2	P80303	420 aa		18.79	■□□□□ 0.6
MRPL28-203	ENST00000429738	IFRD2	Q12894	506 aa	Predicted RBP	18.79	■□□□□ 0.6
MRPL28-203	ENST00000429738	GAB4	Q2WGN9	574 aa		18.79	■□□□□ 0.6
MRPL28-203	ENST00000429738	FBXO43	Q4G163	708 aa		18.79	■□□□□ 0.6
MRPL28-203	ENST00000429738	COBLL1	Q53SF7	1204 aa		18.79	■□□□□ 0.6
MRPL28-203	ENST00000429738	SCAMP5	Q8TAC9	235 aa		18.79	■□□□□ 0.6
MRPL28-203	ENST00000429738	SPATA20	Q8TB22	786 aa		18.79	■□□□□ 0.6
MRPL28-203	ENST00000429738	EZH1	Q92800	747 aa	Predicted RBP	18.79	■□□□□ 0.6
MRPL28-203	ENST00000429738	CD101	Q93033	1021 aa		18.79	■□□□□ 0.6
MRPL28-203	ENST00000429738	FBXO32	Q969P5	355 aa		18.79	■□□□□ 0.6
MRPL28-203	ENST00000429738	EXOC4	Q96A65	974 aa		18.79	■□□□□ 0.6
MRPL28-203	ENST00000429738	SMO	Q99835	787 aa		18.79	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms