RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 ADGRF2Q8IZF7 708 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 BLOC1S5Q8TDH9 187 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 THUMPD3Q9BV44 507 aaKnown RBP13.22□□□□□ -0.29
LDB3-205ENST00000429277 SCUBE2Q9NQ36 999 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 ATMINO43313 823 aaPredicted RBP13.22□□□□□ -0.29
LDB3-205ENST00000429277 TGFB3P10600 412 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 CYP11B1P15538 503 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 C4BPBP20851 252 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 KCNJ1P48048 391 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 PEX5P50542 639 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 ZNF135P52742 658 aaPredicted RBP13.22□□□□□ -0.29
LDB3-205ENST00000429277 BACE1P56817 501 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 KPNB1Q14974 876 aaKnown RBP13.22□□□□□ -0.29
LDB3-205ENST00000429277 ENGASEQ8NFI3 743 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 OSCP1Q8WVF1 389 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 PRDM16Q9HAZ2 1276 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 ITGA11Q9UKX5 1188 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 CYB561D2O14569 222 aa13.21□□□□□ -0.29
LDB3-205ENST00000429277 MBL2P11226 248 aaPredicted RBP13.21□□□□□ -0.29
LDB3-205ENST00000429277 HSD17B3P37058 310 aa13.21□□□□□ -0.29
LDB3-205ENST00000429277 IRAK1P51617 712 aa13.21□□□□□ -0.29
LDB3-205ENST00000429277 PURAQ00577 322 aaKnown RBP13.21□□□□□ -0.29
LDB3-205ENST00000429277 PKN2Q16513 984 aaKnown RBP13.21□□□□□ -0.29
LDB3-205ENST00000429277 USP49Q70CQ1 688 aa13.21□□□□□ -0.29
LDB3-205ENST00000429277 CHMP1BQ7LBR1 199 aa13.21□□□□□ -0.29
LDB3-205ENST00000429277 C10orf88Q9H8K7 445 aa13.21□□□□□ -0.29
LDB3-205ENST00000429277 CDC42BPAQ5VT25 1732 aa13.21□□□□□ -0.29
LDB3-205ENST00000429277 DNAJB2P25686 324 aa13.21□□□□□ -0.29
LDB3-205ENST00000429277 BST2Q10589 180 aaKnown RBP13.21□□□□□ -0.29
LDB3-205ENST00000429277 CCNG2Q16589 344 aa13.21□□□□□ -0.29
LDB3-205ENST00000429277 SGO1Q5FBB7 561 aa13.21□□□□□ -0.29
LDB3-205ENST00000429277 RUSC1Q9BVN2 902 aa13.21□□□□□ -0.29
LDB3-205ENST00000429277 CELF4Q9BZC1 486 aaKnown RBP13.21□□□□□ -0.29
LDB3-205ENST00000429277 IL1RAPL1Q9NZN1 696 aa13.21□□□□□ -0.29
LDB3-205ENST00000429277 MADDQ8WXG6 1647 aa13.21□□□□□ -0.29
LDB3-205ENST00000429277 TM9SF1O15321 606 aa13.21□□□□□ -0.3
LDB3-205ENST00000429277 PROSCO94903 275 aa13.21□□□□□ -0.3
LDB3-205ENST00000429277 CELF2O95319 508 aaKnown RBP13.21□□□□□ -0.3
LDB3-205ENST00000429277 THP07101 528 aa13.21□□□□□ -0.3
LDB3-205ENST00000429277 PLD1Q13393 1074 aa13.21□□□□□ -0.3
LDB3-205ENST00000429277 TTC33Q6PID6 262 aaPredicted RBP13.21□□□□□ -0.3
LDB3-205ENST00000429277 SLC26A11Q86WA9 606 aa13.21□□□□□ -0.3
LDB3-205ENST00000429277 CASP10Q92851 521 aa13.21□□□□□ -0.3
LDB3-205ENST00000429277 CHST12Q9NRB3 414 aa13.21□□□□□ -0.3
LDB3-205ENST00000429277 NCKIPSDQ9NZQ3 722 aa13.21□□□□□ -0.3
LDB3-205ENST00000429277 TRIM10Q9UDY6 481 aa13.21□□□□□ -0.3
LDB3-205ENST00000429277 NUDT2P50583 147 aa13.21□□□□□ -0.3
LDB3-205ENST00000429277 NT5DC4Q86YG4 428 aa13.21□□□□□ -0.3
LDB3-205ENST00000429277 GUCA1AP43080 201 aaPredicted RBP13.2□□□□□ -0.3
LDB3-205ENST00000429277 NPTX2P47972 431 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 EPHB3P54753 998 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 NAA30Q147X3 362 aaPredicted RBP13.2□□□□□ -0.3
LDB3-205ENST00000429277 ANKS6Q68DC2 871 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 OR2W6PQ8NHA6 318 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 JADE3Q92613 823 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 KCTD10Q9H3F6 313 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 KBTBD4Q9NVX7 518 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 HPS5Q9UPZ3 1129 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 TMX2Q9Y320 296 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 HOXB8P17481 243 aaPredicted RBP13.2□□□□□ -0.3
LDB3-205ENST00000429277 SERPINB1P30740 379 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 PMS1P54277 932 aaKnown RBP13.2□□□□□ -0.3
LDB3-205ENST00000429277 PLOD1Q02809 727 aaPredicted RBP13.2□□□□□ -0.3
LDB3-205ENST00000429277 SEL1L3Q68CR1 1132 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 LUZP2Q86TE4 346 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 MARCH10Q8NA82 808 aaPredicted RBP13.2□□□□□ -0.3
LDB3-205ENST00000429277 ADARB2Q9NS39 739 aaKnown RBP13.2□□□□□ -0.3
LDB3-205ENST00000429277 STMN3Q9NZ72 180 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.2□□□□□ -0.3
LDB3-205ENST00000429277 SPATA31A5Q5VU36 1347 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 SPATA31A7Q8IWB4 1347 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 FOXN3O00409 490 aaPredicted RBP13.2□□□□□ -0.3
LDB3-205ENST00000429277 BMP10O95393 424 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
LDB3-205ENST00000429277 MAD2L1Q13257 205 aaPredicted RBP13.2□□□□□ -0.3
LDB3-205ENST00000429277 PREPLQ4J6C6 727 aaPredicted RBP13.2□□□□□ -0.3
LDB3-205ENST00000429277 C11orf63Q6NUN7 778 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 FAM172AQ8WUF8 416 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 ANKRD7Q92527 254 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 FAM111AQ96PZ2 611 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 KLF6Q99612 283 aaPredicted RBP13.2□□□□□ -0.3
LDB3-205ENST00000429277 PRKD2Q9BZL6 878 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 NMRK2Q9NPI5 230 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 CACNA2D2Q9NY47 1150 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 ACOT9Q9Y305 439 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 LMTK2Q8IWU2 1503 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 FAM47E-STBD1D6RA91 191 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 RGL2O15211 777 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 RHOCP08134 193 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 EPB42P16452 691 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 KRT20P35900 424 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 LRRC8DQ7L1W4 858 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 TXNRD3Q86VQ6 643 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 FBXO36Q8NEA4 188 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 ARMC7Q9H6L4 198 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 GGT7Q9UJ14 662 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 PHTF1Q9UMS5 762 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 AP4E1Q9UPM8 1137 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 STARD13Q9Y3M8 1113 aa13.2□□□□□ -0.3
LDB3-205ENST00000429277 CTDNEP1O95476 244 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms