RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 DOCK5Q9H7D0 1870 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 CCDC195A0A1B0GUA6 201 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 B2RBV5 119 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 AVILO75366 819 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 LYPLA2O95372 231 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 KITP10721 976 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 PRKD1Q15139 912 aaPredicted RBP14.96□□□□□ -0.01
MSH5-206ENST00000423982 RASA2Q15283 850 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 FAM110CQ1W6H9 321 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 DCUN1D2Q6PH85 259 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 CEP128Q6ZU80 1094 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 UNC45BQ8IWX7 931 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 ATP11CQ8NB49 1132 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 ZNF398Q8TD17 642 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 ZNF606Q8WXB4 792 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 OXNAD1Q96HP4 312 aaPredicted RBP14.96□□□□□ -0.01
MSH5-206ENST00000423982 CAPNS2Q96L46 248 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 CYTH2Q99418 400 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 VPS11Q9H270 941 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 SLC45A1Q9Y2W3 748 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 SCINQ9Y6U3 715 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 DOCK3Q8IZD9 2030 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 MT-ND3P03897 115 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 ITGAVP06756 1048 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 RARBP10826 455 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 HARSP12081 509 aaKnown RBP14.96□□□□□ -0.01
MSH5-206ENST00000423982 BRD2P25440 801 aaKnown RBP14.96□□□□□ -0.01
MSH5-206ENST00000423982 ETV4P43268 484 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 SERPINB4P48594 390 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 BPIFB4P59827 614 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 KDSRQ06136 332 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 SPDYAQ5MJ70 313 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 DRICH1Q6PGQ1 229 aaPredicted RBP14.96□□□□□ -0.01
MSH5-206ENST00000423982 SAMD3Q8N6K7 520 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 NAT8LQ8N9F0 302 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 SLC35B2Q8TB61 432 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 GATA6Q92908 595 aa14.96□□□□□ -0.01
MSH5-206ENST00000423982 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.96□□□□□ -0.01
MSH5-206ENST00000423982 CPSF2Q9P2I0 782 aaKnown RBP14.96□□□□□ -0.01
MSH5-206ENST00000423982 STX18Q9P2W9 335 aaKnown RBP14.96□□□□□ -0.01
MSH5-206ENST00000423982 RPL26L1Q9UNX3 145 aaKnown RBP14.96□□□□□ -0.01
MSH5-206ENST00000423982 DRG1Q9Y295 367 aaKnown RBP14.96□□□□□ -0.01
MSH5-206ENST00000423982 NFASCO94856 1347 aa14.96□□□□□ -0.02
MSH5-206ENST00000423982 CST8O60676 142 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 ARIH2O95376 493 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 MMP8P22894 467 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 AP1B1Q10567 949 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 PTK7Q13308 1070 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 DEFB115Q30KQ5 88 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 KBTBD12Q3ZCT8 623 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 CCDC62Q6P9F0 684 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 COPS5Q92905 334 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 NKD2Q969F2 451 aaPredicted RBP14.95□□□□□ -0.02
MSH5-206ENST00000423982 XPNPEP1Q9NQW7 623 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 GABBR1Q9UBS5 961 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 KIAA1217Q5T5P2 1943 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 KLHL33A6NCF5 533 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 TM9SF1O15321 606 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 KCNA2P16389 499 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 IL1R2P27930 398 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 BASP1P80723 227 aaKnown RBP14.95□□□□□ -0.02
MSH5-206ENST00000423982 USP37Q86T82 979 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 PRPF39Q86UA1 669 aaKnown RBP14.95□□□□□ -0.02
MSH5-206ENST00000423982 MFN1Q8IWA4 741 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 PPIL6Q8IXY8 311 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 FAM71DQ8N9W8 422 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 RBM15BQ8NDT2 890 aaKnown RBP14.95□□□□□ -0.02
MSH5-206ENST00000423982 TTC1Q99614 292 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 ARHGAP39Q9C0H5 1083 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 MORF4L1Q9UBU8 362 aa14.95□□□□□ -0.02
MSH5-206ENST00000423982 XPO7Q9UIA9 1087 aaKnown RBP14.95□□□□□ -0.02
MSH5-206ENST00000423982 DNAJC25-GNG10A0A024R161 153 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 ANKRD33BA6NCL7 494 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 CYB561D2O14569 222 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 MAP3K7O43318 606 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 ZC3H11AO75152 810 aaKnown RBP eCLIP14.94□□□□□ -0.02
MSH5-206ENST00000423982 PHBP35232 272 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 ELK3P41970 407 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 LIG4P49917 911 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 C1QBPQ07021 282 aaKnown RBP14.94□□□□□ -0.02
MSH5-206ENST00000423982 SREBF2Q12772 1141 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 TAF5Q15542 800 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 DNAJC24Q6P3W2 148 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 GPRASP2Q96D09 838 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 ZNF184Q99676 751 aaPredicted RBP14.94□□□□□ -0.02
MSH5-206ENST00000423982 TRIM4Q9C037 500 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 JPH1Q9HDC5 661 aaPredicted RBP14.94□□□□□ -0.02
MSH5-206ENST00000423982 SSU72Q9NP77 194 aaKnown RBP14.94□□□□□ -0.02
MSH5-206ENST00000423982 PCMTD2Q9NV79 361 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 TCRBV9S1A1TA0A576 114 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 C3orf70A6NLC5 250 aaPredicted RBP14.94□□□□□ -0.02
MSH5-206ENST00000423982 UBA1P22314 1058 aaKnown RBP14.94□□□□□ -0.02
MSH5-206ENST00000423982 IZUMO2Q6UXV1 221 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 ARMCX2Q7L311 632 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 PLEKHH3Q7Z736 793 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 LRRN4Q8WUT4 740 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 PANX3Q96QZ0 392 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 TUBGCP5Q96RT8 1024 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 MTO1Q9Y2Z2 717 aaKnown RBP14.94□□□□□ -0.02
MSH5-206ENST00000423982 MEI4A8MW99 385 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms