RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 TRIM59Q8IWR1 403 aa18.87■□□□□ 0.61
SBDSP1-202ENST00000423945 TTC16Q8NEE8 873 aa18.87■□□□□ 0.61
SBDSP1-202ENST00000423945 PDZD8Q8NEN9 1154 aa18.87■□□□□ 0.61
SBDSP1-202ENST00000423945 OSCP1Q8WVF1 389 aa18.87■□□□□ 0.61
SBDSP1-202ENST00000423945 TMEM176AQ96HP8 235 aa18.87■□□□□ 0.61
SBDSP1-202ENST00000423945 ZFRQ96KR1 1074 aaKnown RBP18.87■□□□□ 0.61
SBDSP1-202ENST00000423945 CLSTN2Q9H4D0 955 aa18.87■□□□□ 0.61
SBDSP1-202ENST00000423945 CPQQ9Y646 472 aa18.87■□□□□ 0.61
SBDSP1-202ENST00000423945 COCHO43405 550 aa18.86■□□□□ 0.61
SBDSP1-202ENST00000423945 LRMPQ12912 555 aa18.86■□□□□ 0.61
SBDSP1-202ENST00000423945 PDGFRLQ15198 375 aa18.86■□□□□ 0.61
SBDSP1-202ENST00000423945 CC2D1AQ6P1N0 951 aaPredicted RBP18.86■□□□□ 0.61
SBDSP1-202ENST00000423945 C1orf228Q6PIY5 440 aa18.86■□□□□ 0.61
SBDSP1-202ENST00000423945 JAKMIP2Q96AA8 810 aa18.86■□□□□ 0.61
SBDSP1-202ENST00000423945 SRRTQ9BXP5 876 aaKnown RBP18.86■□□□□ 0.61
SBDSP1-202ENST00000423945 CCSER2Q9H7U1 834 aa18.86■□□□□ 0.61
SBDSP1-202ENST00000423945 PRMT8Q9NR22 394 aaPredicted RBP18.86■□□□□ 0.61
SBDSP1-202ENST00000423945 DUS2Q9NX74 493 aaKnown RBP18.86■□□□□ 0.61
SBDSP1-202ENST00000423945 SMPD4Q9NXE4 827 aa18.86■□□□□ 0.61
SBDSP1-202ENST00000423945 MYOFQ9NZM1 2061 aa18.86■□□□□ 0.61
SBDSP1-202ENST00000423945 ATG2BQ96BY7 2078 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 LAMTOR5O43504 91 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 PDE6CP51160 858 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 CCINQ13939 588 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 Q6ZS52 159 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 ASCL5Q7RTU5 278 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 TTC39CQ8N584 583 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 KAT5Q92993 513 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 WBP2Q969T9 261 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 HEXIM2Q96MH2 286 aaKnown RBP18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 DUSP16Q9BY84 665 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 FAM124BQ9H5Z6 455 aaPredicted RBP18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 ECT2Q9H8V3 914 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 NMUR1Q9HB89 426 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 FBRSL1Q9HCM7 1045 aaKnown RBP18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 PNPLA8Q9NP80 782 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 LMBRD1Q9NUN5 540 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 OSER1Q9NX31 292 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 RWDD2AQ9UIY3 292 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 FBXO4Q9UKT5 387 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 R4GN57 208 aa18.85■□□□□ 0.61
SBDSP1-202ENST00000423945 KIAA1549LQ6ZVL6 1849 aa18.84■□□□□ 0.61
SBDSP1-202ENST00000423945 SCAMP3O14828 347 aaKnown RBP18.84■□□□□ 0.61
SBDSP1-202ENST00000423945 CYP26A1O43174 497 aa18.84■□□□□ 0.61
SBDSP1-202ENST00000423945 MBL2P11226 248 aaPredicted RBP18.84■□□□□ 0.61
SBDSP1-202ENST00000423945 TDGF1P13385 188 aa18.84■□□□□ 0.61
SBDSP1-202ENST00000423945 ACO1P21399 889 aaKnown RBP18.84■□□□□ 0.61
SBDSP1-202ENST00000423945 GJA4P35212 333 aa18.84■□□□□ 0.61
SBDSP1-202ENST00000423945 IFNAR2P48551 515 aa18.84■□□□□ 0.61
SBDSP1-202ENST00000423945 GAB4Q2WGN9 574 aa18.84■□□□□ 0.61
SBDSP1-202ENST00000423945 TMEM196Q5HYL7 178 aa18.84■□□□□ 0.61
SBDSP1-202ENST00000423945 ARHGAP17Q68EM7 881 aa18.84■□□□□ 0.61
SBDSP1-202ENST00000423945 FSTL4Q6MZW2 842 aa18.84■□□□□ 0.61
SBDSP1-202ENST00000423945 TSSK4Q6SA08 328 aa18.84■□□□□ 0.61
SBDSP1-202ENST00000423945 MAMSTRQ6ZN01 415 aa18.84■□□□□ 0.61
SBDSP1-202ENST00000423945 NELL1Q92832 810 aa18.84■□□□□ 0.61
SBDSP1-202ENST00000423945 FBXO44Q9H4M3 255 aa18.84■□□□□ 0.61
SBDSP1-202ENST00000423945 C2orf42Q9NWW7 574 aa18.84■□□□□ 0.61
SBDSP1-202ENST00000423945 PRR23AA6NEV1 266 aa18.83■□□□□ 0.6
SBDSP1-202ENST00000423945 TRDMT1O14717 391 aaKnown RBP18.83■□□□□ 0.6
SBDSP1-202ENST00000423945 P4HA2O15460 535 aa18.83■□□□□ 0.6
SBDSP1-202ENST00000423945 TRIM21P19474 475 aaKnown RBP18.83■□□□□ 0.6
SBDSP1-202ENST00000423945 TUBP50607 506 aa18.83■□□□□ 0.6
SBDSP1-202ENST00000423945 KIF11P52732 1056 aa18.83■□□□□ 0.6
SBDSP1-202ENST00000423945 CSTF1Q05048 431 aaKnown RBP18.83■□□□□ 0.6
SBDSP1-202ENST00000423945 KCNH2Q12809 1159 aa18.83■□□□□ 0.6
SBDSP1-202ENST00000423945 ZNF528Q3MIS6 628 aa18.83■□□□□ 0.6
SBDSP1-202ENST00000423945 HECTD3Q5T447 861 aa18.83■□□□□ 0.6
SBDSP1-202ENST00000423945 TTC30AQ86WT1 665 aa18.83■□□□□ 0.6
SBDSP1-202ENST00000423945 IRF2BP1Q8IU81 584 aa18.83■□□□□ 0.6
SBDSP1-202ENST00000423945 ARHGEF19Q8IW93 802 aa18.83■□□□□ 0.6
SBDSP1-202ENST00000423945 EZH1Q92800 747 aaPredicted RBP18.83■□□□□ 0.6
SBDSP1-202ENST00000423945 CFAP97Q9P2B7 532 aa18.83■□□□□ 0.6
SBDSP1-202ENST00000423945 SCML2Q9UQR0 700 aa18.83■□□□□ 0.6
SBDSP1-202ENST00000423945 USP3Q9Y6I4 520 aa18.83■□□□□ 0.6
SBDSP1-202ENST00000423945 TULP2O00295 520 aa18.82■□□□□ 0.6
SBDSP1-202ENST00000423945 GFRA3O60609 400 aa18.82■□□□□ 0.6
SBDSP1-202ENST00000423945 GNA14O95837 355 aa18.82■□□□□ 0.6
SBDSP1-202ENST00000423945 TBX18O95935 607 aa18.82■□□□□ 0.6
SBDSP1-202ENST00000423945 HOXC13P31276 330 aa18.82■□□□□ 0.6
SBDSP1-202ENST00000423945 LRRC32Q14392 662 aa18.82■□□□□ 0.6
SBDSP1-202ENST00000423945 DGKKQ5KSL6 1271 aa18.82■□□□□ 0.6
SBDSP1-202ENST00000423945 PKN3Q6P5Z2 889 aa18.82■□□□□ 0.6
SBDSP1-202ENST00000423945 SCD5Q86SK9 330 aa18.82■□□□□ 0.6
SBDSP1-202ENST00000423945 CPA6Q8N4T0 437 aa18.82■□□□□ 0.6
SBDSP1-202ENST00000423945 ATP2A3Q93084 1043 aa18.82■□□□□ 0.6
SBDSP1-202ENST00000423945 NT5C1BQ96P26 610 aa18.82■□□□□ 0.6
SBDSP1-202ENST00000423945 IER2Q9BTL4 223 aa18.82■□□□□ 0.6
SBDSP1-202ENST00000423945 WDR87Q6ZQQ6 2873 aa18.82■□□□□ 0.6
SBDSP1-202ENST00000423945 RIF1Q5UIP0 2472 aaKnown RBP18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 A0A1W2PQH9 124 aa18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 RNF225M0QZC1 329 aaPredicted RBP18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 TLR5O60602 858 aa18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 AFPP02771 609 aaKnown RBP18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 TBXAS1P24557 533 aaPredicted RBP18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 GALK1P51570 392 aa18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 SATB1Q01826 763 aa18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 ADGRG2Q8IZP9 1017 aa18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 SPEM1Q8N4L4 309 aa18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 KIAA1958Q8N8K9 716 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms