RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 TADA2BQ86TJ2 420 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 VSIG1Q86XK7 387 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 FAM71DQ8N9W8 422 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 FAM172AQ8WUF8 416 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 MAML1Q92585 1016 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 RNF157Q96PX1 679 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 NGRNQ9NPE2 291 aaKnown RBP14.4□□□□□ -0.1
CDCA3-202ENST00000422785 MANSC4A6NHS7 340 aaPredicted RBP14.4□□□□□ -0.1
CDCA3-202ENST00000422785 FGFR1P11362 822 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 BRAFP15056 766 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 RPL34P49207 117 aaKnown RBP14.4□□□□□ -0.1
CDCA3-202ENST00000422785 ARL4CP56559 192 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 ROR1Q01973 937 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 BST2Q10589 180 aaKnown RBP14.4□□□□□ -0.1
CDCA3-202ENST00000422785 NR1H3Q13133 447 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 ANKRD22Q5VYY1 191 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 C7orf31Q8N865 590 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 PPM1EQ8WY54 764 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 P3H4Q92791 437 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 CABS1Q96KC9 395 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 DNAI2Q9GZS0 605 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 PPCSQ9HAB8 311 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 SPTLC1O15269 473 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 GNAT1P11488 350 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 CYP2B6P20813 491 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 IL4RP24394 825 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 GCAP28676 217 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 HOXC8P31273 242 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 RGS2P41220 211 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 TAF6P49848 677 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 BCAT1P54687 386 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 HP1BP3Q5SSJ5 553 aaPredicted RBP14.39□□□□□ -0.11
CDCA3-202ENST00000422785 CHADLQ6NUI6 762 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 SCYL2Q6P3W7 929 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 ARCQ7LC44 396 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 RASAL3Q86YV0 1011 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 LRRC34Q8IZ02 419 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.39□□□□□ -0.11
CDCA3-202ENST00000422785 LPIN3Q9BQK8 851 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 SNX25Q9H3E2 840 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 VPS37BQ9H9H4 285 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 KCNK9Q9NPC2 374 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 CYLDQ9NQC7 956 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 TRIP12Q14669 1992 aaPredicted RBP14.39□□□□□ -0.11
CDCA3-202ENST00000422785 FOXO6A8MYZ6 492 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 GOLGA8MH3BSY2 632 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 MDM4O15151 490 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 HCRTO43612 131 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 IGHA2P01877 340 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 PDGFRBP09619 1106 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 LMO2P25791 158 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 SCNN1AP37088 669 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 PTPN9P43378 593 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 IFNAR2P48551 515 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 SV2CQ496J9 727 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 DARS2Q6PI48 645 aaKnown RBP14.39□□□□□ -0.11
CDCA3-202ENST00000422785 C17orf99Q6UX52 265 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 NPNTQ6UXI9 565 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 SRRM1Q8IYB3 904 aaKnown RBP14.39□□□□□ -0.11
CDCA3-202ENST00000422785 CCDC13Q8IYE1 715 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 APPL2Q8NEU8 664 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 B3GNT5Q9BYG0 378 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 IPPQ9Y573 584 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.39□□□□□ -0.11
CDCA3-202ENST00000422785 E7ESA3 106 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 CHRM1P11229 460 aaPredicted RBP14.39□□□□□ -0.11
CDCA3-202ENST00000422785 CCDC130P13994 396 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 MPP2Q14168 576 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 RASA2Q15283 850 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 FSCN1Q16658 493 aaKnown RBP14.39□□□□□ -0.11
CDCA3-202ENST00000422785 SLC26A9Q7LBE3 791 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 PIGWQ7Z7B1 504 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 PLD5Q8N7P1 536 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 DYDC1Q8WWB3 177 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 PCDH18Q9HCL0 1135 aa14.39□□□□□ -0.11
CDCA3-202ENST00000422785 DCAF8L1A6NGE4 600 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 ZNF487B1APH4 448 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 RASA4BC9J798 803 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 RASA4O43374 803 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 CAPN15O75808 1086 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 TGM2P21980 687 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 ADORA2BP29275 332 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 ZNF157P51786 506 aaPredicted RBP14.38□□□□□ -0.11
CDCA3-202ENST00000422785 HDAC4P56524 1084 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 PURAQ00577 322 aaKnown RBP14.38□□□□□ -0.11
CDCA3-202ENST00000422785 GAD2Q05329 585 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 SOX4Q06945 474 aaPredicted RBP14.38□□□□□ -0.11
CDCA3-202ENST00000422785 TMED2Q15363 201 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 ANKRD20A8PQ5CZ79 823 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 ZC3H12AQ5D1E8 599 aaKnown RBP14.38□□□□□ -0.11
CDCA3-202ENST00000422785 FNBP1LQ5T0N5 605 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 SMG8Q8ND04 991 aaKnown RBP14.38□□□□□ -0.11
CDCA3-202ENST00000422785 CENPIQ92674 756 aaPredicted RBP14.38□□□□□ -0.11
CDCA3-202ENST00000422785 APBA2Q99767 749 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 C11orf84Q9BUA3 381 aaPredicted RBP14.38□□□□□ -0.11
CDCA3-202ENST00000422785 SNRNP25Q9BV90 132 aaKnown RBP14.38□□□□□ -0.11
CDCA3-202ENST00000422785 ZMYND8Q9ULU4 1186 aaPredicted RBP14.38□□□□□ -0.11
CDCA3-202ENST00000422785 VIMP08670 466 aaKnown RBP14.38□□□□□ -0.11
CDCA3-202ENST00000422785 ACADSBP45954 432 aa14.38□□□□□ -0.11
CDCA3-202ENST00000422785 LRRC14Q15048 493 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms