RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 CSH1P0DML2 217 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 CSH2P0DML3 217 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 HMGA1P17096 107 aaKnown RBP13.13□□□□□ -0.31
TMEM53-206ENST00000420706 EPHB3P54753 998 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 DAOAP59103 153 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 MRPS5P82675 430 aaKnown RBP13.13□□□□□ -0.31
TMEM53-206ENST00000420706 RBM10P98175 930 aaKnown RBP13.13□□□□□ -0.31
TMEM53-206ENST00000420706 HYAL1Q12794 435 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 IFRD2Q12894 506 aaPredicted RBP13.13□□□□□ -0.31
TMEM53-206ENST00000420706 PPM1LQ5SGD2 360 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 DNAJB7Q7Z6W7 309 aaPredicted RBP13.13□□□□□ -0.31
TMEM53-206ENST00000420706 ZDHHC17Q8IUH5 632 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 REXO1L1PQ8IX06 675 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 SIX6OS1Q8N1H7 587 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 DEFB123Q8N688 67 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 CLEC4CQ8WTT0 213 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 CTNNBL1Q8WYA6 563 aaPredicted RBP13.13□□□□□ -0.31
TMEM53-206ENST00000420706 KHSRPQ92945 711 aaKnown RBP eCLIP13.13□□□□□ -0.31
TMEM53-206ENST00000420706 TTLL2Q9BWV7 592 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 FBXO44Q9H4M3 255 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 AVENQ9NQS1 362 aaPredicted RBP13.13□□□□□ -0.31
TMEM53-206ENST00000420706 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.13□□□□□ -0.31
TMEM53-206ENST00000420706 MYO1AQ9UBC5 1043 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 CHORDC1Q9UHD1 332 aaPredicted RBP13.13□□□□□ -0.31
TMEM53-206ENST00000420706 DPP7Q9UHL4 492 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 NCANO14594 1321 aa13.13□□□□□ -0.31
TMEM53-206ENST00000420706 SIGLEC16A6NMB1 481 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 GOLGA8SH3BPF8 625 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 ATMINO43313 823 aaPredicted RBP13.12□□□□□ -0.31
TMEM53-206ENST00000420706 ABL1P00519 1130 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 YWHAQP27348 245 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 SCNN1AP37088 669 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 MAMLD1Q13495 774 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 VEPH1Q14D04 833 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 TCEAL1Q15170 157 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 EFHC1Q5JVL4 640 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 GPR153Q6NV75 609 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 OLFML1Q6UWY5 402 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 TMEM184AQ6ZMB5 413 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 ZNF662Q6ZS27 426 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 BHLHA9Q7RTU4 235 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 TXLNBQ8N3L3 684 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 EFHBQ8N7U6 833 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 C3orf20Q8ND61 904 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 VN1R2Q8NFZ6 395 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 KIAA1524Q8TCG1 905 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 IRGQQ8WZA9 623 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 PSMG2Q969U7 264 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 PIWIL1Q96J94 861 aaKnown RBP13.12□□□□□ -0.31
TMEM53-206ENST00000420706 MYRFLQ96LU7 910 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 ZNF512Q96ME7 567 aaPredicted RBP13.12□□□□□ -0.31
TMEM53-206ENST00000420706 MAGED2Q9UNF1 606 aaPredicted RBP13.12□□□□□ -0.31
TMEM53-206ENST00000420706 SCML2Q9UQR0 700 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 ZKSCAN5Q9Y2L8 839 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 ASB3Q9Y575 518 aa13.12□□□□□ -0.31
TMEM53-206ENST00000420706 BTNL10A8MVZ5 291 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 CCL16O15467 120 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 ZSCAN12O43309 604 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 RFPL2O75678 378 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 GJB6O95452 261 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 HNRNPA1P09651 372 aaKnown RBP eCLIP13.11□□□□□ -0.31
TMEM53-206ENST00000420706 KRT3P12035 628 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 HOXA9P31269 272 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 ARHGAP25P42331 645 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 KIF5AQ12840 1032 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 TAF10Q12962 218 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 ADAM15Q13444 863 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 TAF5Q15542 800 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 TAF12Q16514 161 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 PPP1R15BQ5SWA1 713 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 FAM102AQ5T9C2 384 aaPredicted RBP13.11□□□□□ -0.31
TMEM53-206ENST00000420706 DNAJC24Q6P3W2 148 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 HFE2Q6ZVN8 426 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 SLC26A9Q7LBE3 791 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 ITIH5Q86UX2 942 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 CCAR2Q8N163 923 aaKnown RBP13.11□□□□□ -0.31
TMEM53-206ENST00000420706 SLC35G2Q8TBE7 412 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 FEZF2Q8TBJ5 459 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 CASP10Q92851 521 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 FBXO32Q969P5 355 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 TRMT2BQ96GJ1 504 aaKnown RBP13.11□□□□□ -0.31
TMEM53-206ENST00000420706 SELENOOQ9BVL4 669 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 NUP85Q9BW27 656 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 LRRC3Q9BY71 257 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 MRPL47Q9HD33 250 aaKnown RBP13.11□□□□□ -0.31
TMEM53-206ENST00000420706 KCND1Q9NSA2 647 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 PARVAQ9NVD7 372 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 ASNSD1Q9NWL6 643 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 ZDHHC7Q9NXF8 308 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 TRMT1Q9NXH9 659 aaKnown RBP13.11□□□□□ -0.31
TMEM53-206ENST00000420706 EHD2Q9NZN4 543 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 SALL4Q9UJQ4 1053 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 TMEM59LQ9UK28 342 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 DUSP10Q9Y6W6 482 aa13.11□□□□□ -0.31
TMEM53-206ENST00000420706 ZNF638Q14966 1978 aaKnown RBP13.11□□□□□ -0.31
TMEM53-206ENST00000420706 A0A0A6YYK5 440 aaPredicted RBP13.1□□□□□ -0.31
TMEM53-206ENST00000420706 CCDC195A0A1B0GUA6 201 aa13.1□□□□□ -0.31
TMEM53-206ENST00000420706 YJEFN3A6XGL0 299 aa13.1□□□□□ -0.31
TMEM53-206ENST00000420706 E7ENQ6 273 aa13.1□□□□□ -0.31
TMEM53-206ENST00000420706 LINC01565O15544 149 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms