RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 HDAC4P56524 1084 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 BASP1P80723 227 aaKnown RBP9.2□□□□□ -0.94
SNCA-206ENST00000420646 PDIA2Q13087 525 aaKnown RBP9.2□□□□□ -0.94
SNCA-206ENST00000420646 DPYSL3Q14195 570 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 EFTUD2Q15029 972 aaKnown RBP eCLIP9.2□□□□□ -0.94
SNCA-206ENST00000420646 POLNQ7Z5Q5 900 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 APPL2Q8NEU8 664 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 FNIP1Q8TF40 1166 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 RSAD2Q8WXG1 361 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 ARHGEF2Q92974 986 aaKnown RBP9.2□□□□□ -0.94
SNCA-206ENST00000420646 FAM149B1Q96BN6 582 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 KCNK16Q96T55 309 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 APBA2Q99767 749 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 KCNK9Q9NPC2 374 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 WDR35Q9P2L0 1181 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 TPX2Q9ULW0 747 aaKnown RBP9.2□□□□□ -0.94
SNCA-206ENST00000420646 GBP1P32455 592 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 CLCNKBP51801 687 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 CRYBB1P53674 252 aaPredicted RBP9.2□□□□□ -0.94
SNCA-206ENST00000420646 SLC6A3Q01959 620 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 PRKCZQ05513 592 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 KRT81Q14533 505 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 KYAT1Q16773 422 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 C6orf118Q5T5N4 469 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 RNASEH2BQ5TBB1 312 aaKnown RBP9.2□□□□□ -0.94
SNCA-206ENST00000420646 EMC10Q5UCC4 262 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 BBS12Q6ZW61 710 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 TRMT10CQ7L0Y3 403 aaKnown RBP9.2□□□□□ -0.94
SNCA-206ENST00000420646 SRLQ86TD4 932 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 FAM131BQ86XD5 332 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 SRRM1Q8IYB3 904 aaKnown RBP9.2□□□□□ -0.94
SNCA-206ENST00000420646 ADGRF2Q8IZF7 708 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 GDAP1Q8TB36 358 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 PGM2Q96G03 612 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 TRIM56Q9BRZ2 755 aaKnown RBP9.2□□□□□ -0.94
SNCA-206ENST00000420646 MAK16Q9BXY0 300 aaKnown RBP9.2□□□□□ -0.94
SNCA-206ENST00000420646 SNX25Q9H3E2 840 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 VPS37BQ9H9H4 285 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 TMEM30AQ9NV96 361 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 NAALADL1Q9UQQ1 740 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 FAM155AB1AL88 458 aaPredicted RBP9.19□□□□□ -0.94
SNCA-206ENST00000420646 EBAG9O00559 213 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 TRAPPC3O43617 180 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 TMEM63AO94886 807 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 AKR1A1P14550 325 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 CCND3P30281 292 aaPredicted RBP9.19□□□□□ -0.94
SNCA-206ENST00000420646 SDC4P31431 198 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 CACNA2D1P54289 1103 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 SMAD1Q15797 465 aaKnown RBP9.19□□□□□ -0.94
SNCA-206ENST00000420646 DARS2Q6PI48 645 aaKnown RBP9.19□□□□□ -0.94
SNCA-206ENST00000420646 TMEM110Q86TL2 294 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 CCDC185Q8N715 623 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 PCDH19Q8TAB3 1148 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 CPT1BQ92523 772 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 NKD2Q969F2 451 aaPredicted RBP9.19□□□□□ -0.94
SNCA-206ENST00000420646 WDR83Q9BRX9 315 aaKnown RBP9.19□□□□□ -0.94
SNCA-206ENST00000420646 SNRNP25Q9BV90 132 aaKnown RBP9.19□□□□□ -0.94
SNCA-206ENST00000420646 SLC4A5Q9BY07 1137 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 ZFYVE28Q9HCC9 887 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 CWC15Q9P013 229 aaKnown RBP9.19□□□□□ -0.94
SNCA-206ENST00000420646 GMNCA6NCL1 334 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 H7C0C1 242 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 MYO1CO00159 1063 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 CYB561D2O14569 222 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 HUS1O60921 280 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 SPAG7O75391 227 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 POMCP01189 267 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 ITGAVP06756 1048 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 GHRP10912 638 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 MMP13P45452 471 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 ATP5OP48047 213 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 TAF6P49848 677 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 SCNN1GP51170 649 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 COPS2P61201 443 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 ADIGQ0VDE8 80 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 TMED2Q15363 201 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 HFE2Q6ZVN8 426 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 SYDE1Q6ZW31 735 aaPredicted RBP9.19□□□□□ -0.94
SNCA-206ENST00000420646 PIGZQ86VD9 579 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 FUKQ8N0W3 1084 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 ZCCHC9Q8N567 271 aaKnown RBP9.19□□□□□ -0.94
SNCA-206ENST00000420646 ARFGAP2Q8N6H7 521 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 PQLC3Q8N755 202 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 LRRC52Q8N7C0 313 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 PRCCQ92733 491 aaPredicted RBP9.19□□□□□ -0.94
SNCA-206ENST00000420646 CEP41Q9BYV8 373 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 DHX35Q9H5Z1 703 aaKnown RBP9.19□□□□□ -0.94
SNCA-206ENST00000420646 ETNK2Q9NVF9 386 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 PIH1D1Q9NWS0 290 aaKnown RBP9.19□□□□□ -0.94
SNCA-206ENST00000420646 FAM169AQ9Y6X4 670 aa9.19□□□□□ -0.94
SNCA-206ENST00000420646 TMEM120BA0PK00 339 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 CD52P31358 61 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 THPOP40225 353 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 APLP1P51693 650 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 MAP3K7CLP57077 242 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 GBE1Q04446 702 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 IFT88Q13099 833 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 SYPL2Q5VXT5 272 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 PAQR9Q6ZVX9 377 aa9.18□□□□□ -0.94
SNCA-206ENST00000420646 NT5DC4Q86YG4 428 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms