RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 PAX7P23759 505 aa13.52□□□□□ -0.25
LINC00642-201ENST00000419459 GBP1P32455 592 aa13.52□□□□□ -0.25
LINC00642-201ENST00000419459 DHX9Q08211 1270 aaKnown RBP13.52□□□□□ -0.25
LINC00642-201ENST00000419459 DCLRE1AQ6PJP8 1040 aa13.52□□□□□ -0.25
LINC00642-201ENST00000419459 ENOSF1Q7L5Y1 443 aa13.52□□□□□ -0.25
LINC00642-201ENST00000419459 UBR7Q8N806 425 aa13.52□□□□□ -0.25
LINC00642-201ENST00000419459 EPS8L1Q8TE68 723 aa13.52□□□□□ -0.25
LINC00642-201ENST00000419459 UROC1Q96N76 676 aa13.52□□□□□ -0.25
LINC00642-201ENST00000419459 FMO2Q99518 471 aa13.52□□□□□ -0.25
LINC00642-201ENST00000419459 UBE2OQ9C0C9 1292 aaKnown RBP13.52□□□□□ -0.25
LINC00642-201ENST00000419459 NOP53Q9NZM5 478 aaKnown RBP13.52□□□□□ -0.25
LINC00642-201ENST00000419459 ADAMTS1Q9UHI8 967 aa13.52□□□□□ -0.25
LINC00642-201ENST00000419459 BAIAP2L1Q9UHR4 511 aa13.52□□□□□ -0.25
LINC00642-201ENST00000419459 MTUS1Q9ULD2 1270 aa13.52□□□□□ -0.25
LINC00642-201ENST00000419459 PLXNA4Q9HCM2 1894 aa13.52□□□□□ -0.25
LINC00642-201ENST00000419459 TRIOBPQ9H2D6 2365 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 DAPK3O43293 454 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 CILPO75339 1184 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 CFHP08603 1231 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 TKTP29401 623 aaKnown RBP13.51□□□□□ -0.25
LINC00642-201ENST00000419459 PRKCIP41743 596 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 PSMC1P62191 440 aaKnown RBP13.51□□□□□ -0.25
LINC00642-201ENST00000419459 HTRA4P83105 476 aaPredicted RBP13.51□□□□□ -0.25
LINC00642-201ENST00000419459 RASIP1Q5U651 963 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 KCNT2Q6UVM3 1135 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 FAM43BQ6ZT52 329 aaPredicted RBP13.51□□□□□ -0.25
LINC00642-201ENST00000419459 TAS1R1Q7RTX1 841 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 NOP9Q86U38 636 aaKnown RBP13.51□□□□□ -0.25
LINC00642-201ENST00000419459 OSTM1Q86WC4 334 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 PALB2Q86YC2 1186 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 SLC9A7Q96T83 725 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 NAP1L3Q99457 506 aaPredicted RBP13.51□□□□□ -0.25
LINC00642-201ENST00000419459 ELOVL4Q9GZR5 314 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 HOMER3Q9NSC5 361 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 INSL6Q9Y581 213 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 ATP2C2O75185 946 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 MMEP08473 750 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 LINC00271P0C7V0 271 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 BRD2P25440 801 aaKnown RBP13.51□□□□□ -0.25
LINC00642-201ENST00000419459 RAD23BP54727 409 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 DRG2P55039 364 aaKnown RBP13.51□□□□□ -0.25
LINC00642-201ENST00000419459 RNASE9P60153 205 aaKnown RBP13.51□□□□□ -0.25
LINC00642-201ENST00000419459 FAM171A1Q5VUB5 890 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 TRPM8Q7Z2W7 1104 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 ZNF571Q7Z3V5 609 aaPredicted RBP13.51□□□□□ -0.25
LINC00642-201ENST00000419459 ACOT1Q86TX2 421 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 DDX42Q86XP3 938 aaKnown RBP eCLIP13.51□□□□□ -0.25
LINC00642-201ENST00000419459 CMTR2Q8IYT2 770 aaKnown RBP13.51□□□□□ -0.25
LINC00642-201ENST00000419459 ARMC2Q8NEN0 867 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 TPCN2Q8NHX9 752 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 NSMCE1Q8WV22 266 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 ATXN2LQ8WWM7 1075 aaKnown RBP13.51□□□□□ -0.25
LINC00642-201ENST00000419459 GDF15Q99988 308 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 ZSWIM1Q9BR11 485 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 PLCD4Q9BRC7 762 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 TMEM109Q9BVC6 243 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 DDX47Q9H0S4 455 aaKnown RBP13.51□□□□□ -0.25
LINC00642-201ENST00000419459 STXBP5LQ9Y2K9 1186 aa13.51□□□□□ -0.25
LINC00642-201ENST00000419459 A8MXQ7 604 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 AGTP01019 485 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 CYP11B1P15538 503 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 CCND1P24385 295 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 GNA15P30679 374 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 PBX2P40425 430 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 INCA1Q0VD86 236 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 KIAA0319Q5VV43 1072 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 FUT10Q6P4F1 479 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 PEX26Q7Z412 305 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 VPS36Q86VN1 386 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 SLC4A11Q8NBS3 891 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 TFAP2BQ92481 460 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 SUSD3Q96L08 255 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 RAD9AQ99638 391 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 VN1R3Q9BXE9 311 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 PACSIN1Q9BY11 444 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 MTIF3Q9H2K0 278 aaKnown RBP13.5□□□□□ -0.25
LINC00642-201ENST00000419459 PABPC3Q9H361 631 aaKnown RBP13.5□□□□□ -0.25
LINC00642-201ENST00000419459 FAM49BQ9NUQ9 324 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 SEPT11Q9NVA2 429 aaKnown RBP13.5□□□□□ -0.25
LINC00642-201ENST00000419459 DDX43Q9NXZ2 648 aaKnown RBP13.5□□□□□ -0.25
LINC00642-201ENST00000419459 NAGPAQ9UK23 515 aa13.5□□□□□ -0.25
LINC00642-201ENST00000419459 BARX2Q9UMQ3 279 aaPredicted RBP13.5□□□□□ -0.25
LINC00642-201ENST00000419459 FAM187AA6NFU0 413 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 M0QZQ0 153 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 C2CD2LO14523 706 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 ODC1P11926 461 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 CD19P15391 556 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 CHN1P15882 459 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 FLT3P36888 993 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 GNL1P36915 607 aaPredicted RBP13.49□□□□□ -0.25
LINC00642-201ENST00000419459 PDE6CP51160 858 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 ZNF132P52740 706 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 ADCY2Q08462 1091 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 C6orf118Q5T5N4 469 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 EP400NLQ6ZTU2 488 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 PASD1Q8IV76 773 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 GLYCTKQ8IVS8 523 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 FIBCD1Q8N539 461 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 IGSF21Q96ID5 467 aa13.49□□□□□ -0.25
LINC00642-201ENST00000419459 TMEM209Q96SK2 561 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms