RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 NAT10Q9H0A0 1025 aaKnown RBP11.13□□□□□ -0.63
RFC1-203ENST00000418436 SMOC2Q9H3U7 446 aa11.13□□□□□ -0.63
RFC1-203ENST00000418436 PNPLA8Q9NP80 782 aa11.13□□□□□ -0.63
RFC1-203ENST00000418436 SIX2Q9NPC8 291 aa11.13□□□□□ -0.63
RFC1-203ENST00000418436 C11orf16Q9NQ32 467 aa11.13□□□□□ -0.63
RFC1-203ENST00000418436 APEX2Q9UBZ4 518 aa11.13□□□□□ -0.63
RFC1-203ENST00000418436 DUSP12Q9UNI6 340 aa11.13□□□□□ -0.63
RFC1-203ENST00000418436 TECTAO75443 2155 aa11.13□□□□□ -0.63
RFC1-203ENST00000418436 KIF26AQ9ULI4 1882 aaPredicted RBP11.12□□□□□ -0.63
RFC1-203ENST00000418436 HELZP42694 1942 aaKnown RBP11.12□□□□□ -0.63
RFC1-203ENST00000418436 NARSO43776 548 aaKnown RBP11.12□□□□□ -0.63
RFC1-203ENST00000418436 GPR37L1O60883 481 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 RTN3O95197 1032 aaPredicted RBP11.12□□□□□ -0.63
RFC1-203ENST00000418436 VDRP11473 427 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 SRFP11831 508 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 NPR3P17342 541 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 PPP3CCP48454 512 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 MAP3K7CLP57077 242 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 KRT31Q15323 416 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 MSS51Q4VC12 460 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 SGO2Q562F6 1265 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 TMEM270Q6UE05 265 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 TRIM67Q6ZTA4 783 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 ARID3BQ8IVW6 561 aaPredicted RBP11.12□□□□□ -0.63
RFC1-203ENST00000418436 ANKRD52Q8NB46 1076 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 MRPS31Q92665 395 aaKnown RBP11.12□□□□□ -0.63
RFC1-203ENST00000418436 E2F7Q96AV8 911 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 RSPRY1Q96DX4 576 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 ASIC4Q96FT7 647 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 KXD1Q9BQD3 176 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 C1QTNF1Q9BXJ1 281 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 UBXN6Q9BZV1 441 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 ZFP14Q9HCL3 533 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 UBE2TQ9NPD8 197 aaPredicted RBP11.12□□□□□ -0.63
RFC1-203ENST00000418436 SLC2A4RGQ9NR83 387 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 TAB2Q9NYJ8 693 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 LIMA1Q9UHB6 759 aaKnown RBP11.12□□□□□ -0.63
RFC1-203ENST00000418436 PCDHB4Q9Y5E5 795 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 MYO16Q9Y6X6 1858 aa11.12□□□□□ -0.63
RFC1-203ENST00000418436 NCANO14594 1321 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 SYCE3A1L190 88 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 ZNF840PA6NDX5 716 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 O00370 1275 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 ZDHHC11BP0C7U3 371 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 PFKLP17858 780 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 YWHAQP27348 245 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 VIPR2P41587 438 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 SLC5A3P53794 718 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 MFAP3P55082 362 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 APBA1Q02410 837 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 TAF10Q12962 218 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 PKDCCQ504Y2 493 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 PLA2G2CQ5R387 149 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 SNX30Q5VWJ9 437 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 TXNDC8Q6A555 127 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 GJB7Q6PEY0 223 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 VITQ6UXI7 678 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 LIAT1Q6ZQX7 453 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 APTXQ7Z2E3 356 aaKnown RBP11.11□□□□□ -0.63
RFC1-203ENST00000418436 BMP8AQ7Z5Y6 402 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 TTC30AQ86WT1 665 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 MFSD6LQ8IWD5 586 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 DHX40Q8IX18 779 aaKnown RBP11.11□□□□□ -0.63
RFC1-203ENST00000418436 CMTM8Q8IZV2 173 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 AOPEPQ8N6M6 819 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 MAB21L3Q8N8X9 362 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 RBBP8NLQ8NC74 664 aaPredicted RBP11.11□□□□□ -0.63
RFC1-203ENST00000418436 SCAMP5Q8TAC9 235 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 OVCA2Q8WZ82 227 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 TFAP2BQ92481 460 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 ZSWIM1Q9BR11 485 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 VPS16Q9H269 839 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 SLITRK6Q9H5Y7 841 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 OBP2AQ9NY56 170 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 TRPM5Q9NZQ8 1165 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 COL4A2P08572 1712 aa11.11□□□□□ -0.63
RFC1-203ENST00000418436 SMTNL1A8MU46 457 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 HEPACAM2A8MVW5 462 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 PRAMEF12O95522 483 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 OLFM2O95897 454 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 CD19P15391 556 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 PSMC3P17980 439 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 ZNF165P49910 485 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 COPB1P53618 953 aaKnown RBP11.1□□□□□ -0.63
RFC1-203ENST00000418436 GPC5P78333 572 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 FCHO2Q0JRZ9 810 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 ZNF268Q14587 947 aaPredicted RBP11.1□□□□□ -0.63
RFC1-203ENST00000418436 IQCB1Q15051 598 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 CNGA2Q16280 664 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 ZSCAN23Q3MJ62 389 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 RAB41Q5JT25 222 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 LCLAT1Q6UWP7 414 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 Q6ZNB5 142 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 GPRIN1Q7Z2K8 1008 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 PDZD8Q8NEN9 1154 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 DEPDC1BQ8WUY9 529 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 SHC3Q92529 594 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 LRRC3BQ96PB8 259 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 SLITRK1Q96PX8 696 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 SLC22A12Q96S37 553 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms