RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 CYP3A7P24462 503 aa17.89■□□□□ 0.46
PHRF1-202ENST00000413872 SP3Q02447 781 aa17.89■□□□□ 0.46
PHRF1-202ENST00000413872 HIC1Q14526 733 aa17.89■□□□□ 0.46
PHRF1-202ENST00000413872 DNAL1Q4LDG9 190 aa17.89■□□□□ 0.46
PHRF1-202ENST00000413872 BTNL9Q6UXG8 535 aa17.89■□□□□ 0.46
PHRF1-202ENST00000413872 HASPINQ8TF76 798 aa17.89■□□□□ 0.46
PHRF1-202ENST00000413872 SERPINB11Q96P15 392 aa17.89■□□□□ 0.46
PHRF1-202ENST00000413872 MRPL1Q9BYD6 325 aaKnown RBP17.89■□□□□ 0.46
PHRF1-202ENST00000413872 CELF4Q9BZC1 486 aaKnown RBP17.89■□□□□ 0.46
PHRF1-202ENST00000413872 THG1LQ9NWX6 298 aaKnown RBP17.89■□□□□ 0.46
PHRF1-202ENST00000413872 WHRNQ9P202 907 aa17.89■□□□□ 0.46
PHRF1-202ENST00000413872 SOX10P56693 466 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 RHOAP61586 193 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 LZTR1Q8N653 840 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 ZNF557Q8N988 423 aaPredicted RBP17.89■□□□□ 0.45
PHRF1-202ENST00000413872 ZNF606Q8WXB4 792 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 PDGFCQ9NRA1 345 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 NMRK1Q9NWW6 199 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 CHN1P15882 459 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 FAM171A1Q5VUB5 890 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 SLC47A2Q86VL8 602 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 CATSPER1Q8NEC5 780 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 ACTRT1Q8TDG2 376 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 APBA2Q99767 749 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 ALG13Q9NP73 1137 aaKnown RBP17.89■□□□□ 0.45
PHRF1-202ENST00000413872 CNTNAP2Q9UHC6 1331 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 CAMTA1Q9Y6Y1 1673 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 OTUD4Q01804 1114 aaKnown RBP17.89■□□□□ 0.45
PHRF1-202ENST00000413872 IKBKEQ14164 716 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 RGS9BPQ6ZS82 235 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 MAF1Q9H063 256 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 KCNMB3Q9NPA1 279 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 CDYLQ9Y232 598 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 NR2E3Q9Y5X4 410 aa17.89■□□□□ 0.45
PHRF1-202ENST00000413872 CARSP49589 748 aaKnown RBP17.88■□□□□ 0.45
PHRF1-202ENST00000413872 CCNG2Q16589 344 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 C6orf10Q5SRN2 563 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 OR9Q1Q8NGQ5 310 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 UROC1Q96N76 676 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 PRMT1Q99873 361 aaKnown RBP17.88■□□□□ 0.45
PHRF1-202ENST00000413872 SYNDIG1Q9H7V2 258 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 TBC1D13Q9NVG8 400 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 CHORDC1Q9UHD1 332 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-202ENST00000413872 RPSAP08865 295 aaKnown RBP17.88■□□□□ 0.45
PHRF1-202ENST00000413872 SLC12A3P55017 1021 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 PDE1CQ14123 709 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-202ENST00000413872 PLPPR4Q7Z2D5 763 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 TRIM48Q8IWZ4 208 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 ECT2Q9H8V3 914 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 SELENONQ9NZV5 590 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 PLA2G4CQ9UP65 541 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 H2AFYO75367 372 aaKnown RBP17.88■□□□□ 0.45
PHRF1-202ENST00000413872 YWHAZP63104 245 aaKnown RBP17.88■□□□□ 0.45
PHRF1-202ENST00000413872 ACAP1Q15027 740 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 ZNF571Q7Z3V5 609 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-202ENST00000413872 PATL1Q86TB9 770 aaKnown RBP17.88■□□□□ 0.45
PHRF1-202ENST00000413872 MTO1Q9Y2Z2 717 aaKnown RBP17.88■□□□□ 0.45
PHRF1-202ENST00000413872 LACTBL1A8MY62 500 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 EML1O00423 815 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 YWHAQP27348 245 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 PRDM16Q9HAZ2 1276 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 MORC2Q9Y6X9 1032 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-202ENST00000413872 C3P01024 1663 aa17.88■□□□□ 0.45
PHRF1-202ENST00000413872 CSDE1O75534 798 aaKnown RBP17.87■□□□□ 0.45
PHRF1-202ENST00000413872 PSMD10O75832 226 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 AKAP5P24588 427 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 SARSP49591 514 aaKnown RBP17.87■□□□□ 0.45
PHRF1-202ENST00000413872 POU4F1Q01851 419 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 DENND5BQ6ZUT9 1274 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 MCOLN2Q8IZK6 566 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 TRAPPC12Q8WVT3 735 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 ACSF2Q96CM8 615 aaPredicted RBP17.87■□□□□ 0.45
PHRF1-202ENST00000413872 BLOC1S4Q9NUP1 217 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 SYCE1LA8MT33 242 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 MEFVO15553 781 aaPredicted RBP17.87■□□□□ 0.45
PHRF1-202ENST00000413872 MYL4P12829 197 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 KLRC2P26717 231 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 PLA2G4AP47712 749 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 TBX4P57082 545 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 RARS2Q5T160 578 aaKnown RBP17.87■□□□□ 0.45
PHRF1-202ENST00000413872 REM2Q8IYK8 340 aaPredicted RBP17.87■□□□□ 0.45
PHRF1-202ENST00000413872 SLC35C1Q96A29 364 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 NAF1Q96HR8 494 aaKnown RBP17.87■□□□□ 0.45
PHRF1-202ENST00000413872 APOL5Q9BWW9 433 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 EPN3Q9H201 632 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 ITM2BQ9Y287 266 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 HNRNPCL2B2RXH8 293 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 GLRA3O75311 464 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 SRP72O76094 671 aaKnown RBP17.87■□□□□ 0.45
PHRF1-202ENST00000413872 CKBP12277 381 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 TAL1P17542 331 aaPredicted RBP17.87■□□□□ 0.45
PHRF1-202ENST00000413872 EARS2Q5JPH6 523 aaKnown RBP17.87■□□□□ 0.45
PHRF1-202ENST00000413872 ERMARDQ5T6L9 678 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 XPO6Q96QU8 1125 aaKnown RBP17.87■□□□□ 0.45
PHRF1-202ENST00000413872 KCNK16Q96T55 309 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 TRIM4Q9C037 500 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 IGF2BP3O00425 579 aaKnown RBP eCLIP17.87■□□□□ 0.45
PHRF1-202ENST00000413872 HMGCRP04035 888 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 CNTFP26441 200 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 GUCY1A3Q02108 690 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms