RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 SRGAP2CP0DJJ0 459 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 IL9P15248 144 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 ATF7P17544 494 aaPredicted RBP5.79□□□□□ -1.48
LINC00342-201ENST00000412393 LAG3P18627 525 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 MCM7P33993 719 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 RAB27AP51159 221 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 GSDMDP57764 484 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 KRT85P78386 507 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 PRR5P85299 388 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 UBE3AQ05086 875 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 LAMTOR4Q0VGL1 99 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 HYAL1Q12794 435 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 GNL2Q13823 731 aaKnown RBP5.79□□□□□ -1.48
LINC00342-201ENST00000412393 EMC2Q15006 297 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 CLLU1OSQ5K130 101 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 AXDND1Q5T1B0 1012 aaPredicted RBP5.79□□□□□ -1.48
LINC00342-201ENST00000412393 BICRALQ6AI39 1079 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 TWF2Q6IBS0 349 aaKnown RBP5.79□□□□□ -1.48
LINC00342-201ENST00000412393 KCNT2Q6UVM3 1135 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 CCDC186Q7Z3E2 898 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 SRGAP1Q7Z6B7 1085 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 ADGRD2Q7Z7M1 963 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 FAM124AQ86V42 546 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 THNSL1Q8IYQ7 743 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 LGI4Q8N135 537 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 LRRC43Q8N309 656 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 IQUBQ8NA54 791 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 COLGALT1Q8NBJ5 622 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 TMEM52Q8NDY8 209 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.79□□□□□ -1.48
LINC00342-201ENST00000412393 NEK9Q8TD19 979 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 MICAL1Q8TDZ2 1067 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 PRPF31Q8WWY3 499 aaKnown RBP5.79□□□□□ -1.48
LINC00342-201ENST00000412393 PSPC1Q8WXF1 523 aaKnown RBP5.79□□□□□ -1.48
LINC00342-201ENST00000412393 TMEM143Q96AN5 459 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 CCDC43Q96MW1 224 aaKnown RBP5.79□□□□□ -1.48
LINC00342-201ENST00000412393 ZNF558Q96NG5 402 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 TMEM74Q96NL1 305 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 CASD1Q96PB1 797 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 MTMR9Q96QG7 549 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 BPIFA3Q9BQP9 254 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 TMEM60Q9H2L4 133 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 FOXP1Q9H334 677 aaPredicted RBP5.79□□□□□ -1.48
LINC00342-201ENST00000412393 ZSCAN16Q9H4T2 348 aaPredicted RBP5.79□□□□□ -1.48
LINC00342-201ENST00000412393 CWH43Q9H720 699 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 IFT122Q9HBG6 1241 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 PCDH18Q9HCL0 1135 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 ANKEF1Q9NU02 776 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 DBR1Q9UK59 544 aaKnown RBP5.79□□□□□ -1.48
LINC00342-201ENST00000412393 PIN4Q9Y237 131 aaKnown RBP5.79□□□□□ -1.48
LINC00342-201ENST00000412393 FAM50BQ9Y247 325 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 MYO10Q9HD67 2058 aa5.79□□□□□ -1.48
LINC00342-201ENST00000412393 VCANP13611 3396 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 LINC01565O15544 149 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 ZNF623O75123 536 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 ZRANB2O95218 330 aaKnown RBP eCLIP5.78□□□□□ -1.48
LINC00342-201ENST00000412393 SLU7O95391 586 aaKnown RBP5.78□□□□□ -1.48
LINC00342-201ENST00000412393 ASGR2P07307 311 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 OR52Z1P0C646 297 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 PPM1AP35813 382 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 LTBRP36941 435 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 CTSKP43235 329 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 NRIP1P48552 1158 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 KCNA1Q09470 495 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 ORC2Q13416 577 aaPredicted RBP5.78□□□□□ -1.48
LINC00342-201ENST00000412393 ADAM15Q13444 863 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 MXD4Q14582 209 aaPredicted RBP5.78□□□□□ -1.48
LINC00342-201ENST00000412393 SLC9A5Q14940 896 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 PTPN14Q15678 1187 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 ZNF174Q15697 407 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 LONRF3Q496Y0 759 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 BORAQ6PGQ7 559 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 LRRC55Q6ZSA7 311 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 ZNF771Q7L3S4 317 aaPredicted RBP5.78□□□□□ -1.48
LINC00342-201ENST00000412393 RBM23Q86U06 439 aaKnown RBP5.78□□□□□ -1.48
LINC00342-201ENST00000412393 RELL1Q8IUW5 271 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 FAM178BQ8IXR5 827 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 RNF149Q8NC42 400 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 FBXO18Q8NFZ0 1043 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 PIGOQ8TEQ8 1089 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 CACTINQ8WUQ7 758 aaKnown RBP5.78□□□□□ -1.48
LINC00342-201ENST00000412393 MRPS27Q92552 414 aaKnown RBP5.78□□□□□ -1.48
LINC00342-201ENST00000412393 LPPQ93052 612 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 TSPAN17Q96FV3 270 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 CHAMP1Q96JM3 812 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 HSD17B14Q9BPX1 270 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 RSRP1Q9BUV0 290 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 TRAIPQ9BWF2 469 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 MRPL9Q9BYD2 267 aaKnown RBP5.78□□□□□ -1.48
LINC00342-201ENST00000412393 NUP62CLQ9H1M0 184 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 TLE6Q9H808 572 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 YY1AP1Q9H869 796 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 MINDY3Q9H8M7 445 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 TUFT1Q9NNX1 390 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 XPNPEP1Q9NQW7 623 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 TLR9Q9NR96 1032 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 AGPAT5Q9NUQ2 364 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 SPG21Q9NZD8 308 aa5.78□□□□□ -1.48
LINC00342-201ENST00000412393 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.78□□□□□ -1.48
LINC00342-201ENST00000412393 PUF60Q9UHX1 559 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms