RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 PFKLP17858 780 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 PSMC3P17980 439 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 CDK11BP21127 795 aaKnown RBP13.89□□□□□ -0.19
HDAC8-210ENST00000412342 RFX1P22670 979 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 CLCN1P35523 988 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 ZXDBP98169 803 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 GRM2Q14416 872 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 DRAP1Q14919 205 aaPredicted RBP13.89□□□□□ -0.19
HDAC8-210ENST00000412342 SYCP1Q15431 976 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 MEA1Q16626 185 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 FKBP15Q5T1M5 1219 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 IER5LQ5T953 404 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 BHLHA9Q7RTU4 235 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 CCDC186Q7Z3E2 898 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 MFSD6LQ8IWD5 586 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 ARL14EPQ8N8R7 260 aaPredicted RBP13.89□□□□□ -0.19
HDAC8-210ENST00000412342 UBA3Q8TBC4 463 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 DEPDC1BQ8WUY9 529 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 ZNF606Q8WXB4 792 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 KCTD13Q8WZ19 329 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 E2F7Q96AV8 911 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 RNF38Q9H0F5 515 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 FBXO44Q9H4M3 255 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 NMUR1Q9HB89 426 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 TRPC7Q9HCX4 862 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 RTN4Q9NQC3 1192 aaKnown RBP13.89□□□□□ -0.19
HDAC8-210ENST00000412342 OSER1Q9NX31 292 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 HESX1Q9UBX0 185 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 CHORDC1Q9UHD1 332 aaPredicted RBP13.89□□□□□ -0.19
HDAC8-210ENST00000412342 KMT2EQ8IZD2 1858 aa13.89□□□□□ -0.19
HDAC8-210ENST00000412342 TRAV19A0A0A6YYK7 116 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 A0A1B0GTH6 734 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 M0QYV0 167 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 TEX33O43247 280 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 GPR37L1O60883 481 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 TPM2P07951 284 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 TCF3P15923 654 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 GNA15P30679 374 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 AVPR1AP37288 418 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 GPD2P43304 727 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 RPL34P49207 117 aaKnown RBP13.88□□□□□ -0.19
HDAC8-210ENST00000412342 TUBP50607 506 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 JAM2P57087 298 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 SLC7A9P82251 487 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 USP4Q13107 963 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 ZNF77Q15935 545 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 PMF1Q6P1K2 205 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 SCD5Q86SK9 330 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 CELF5Q8N6W0 485 aaKnown RBP13.88□□□□□ -0.19
HDAC8-210ENST00000412342 SECISBP2LQ93073 1101 aaKnown RBP13.88□□□□□ -0.19
HDAC8-210ENST00000412342 ZFRQ96KR1 1074 aaKnown RBP13.88□□□□□ -0.19
HDAC8-210ENST00000412342 STK33Q9BYT3 514 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 KIF9Q9HAQ2 790 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 TDP1Q9NUW8 608 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 WNT16Q9UBV4 365 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 ARHGAP26Q9UNA1 814 aa13.88□□□□□ -0.19
HDAC8-210ENST00000412342 KRBA1A5PL33 1030 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 FAM86C2PA6NEL3 165 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 TMEM221A6NGB7 291 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 SHISA7A6NL88 538 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 F8VZ95 297 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 M0R296 226 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 COCHO43405 550 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 PDGFBP01127 241 aaPredicted RBP13.87□□□□□ -0.19
HDAC8-210ENST00000412342 CKMP06732 381 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 USP17L7P0C7H9 530 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 HDCP19113 662 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 TKTL1P51854 596 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 UBXN1Q04323 297 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 PM20D1Q6GTS8 502 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 DENND1BQ6P3S1 775 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 LRSAM1Q6UWE0 723 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 BMP8AQ7Z5Y6 402 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 SLC47A2Q86VL8 602 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 BPIFB1Q8TDL5 484 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 NAP1L5Q96NT1 182 aaPredicted RBP13.87□□□□□ -0.19
HDAC8-210ENST00000412342 TRMT61BQ9BVS5 477 aaKnown RBP13.87□□□□□ -0.19
HDAC8-210ENST00000412342 C1QTNF1Q9BXJ1 281 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 CCSER2Q9H7U1 834 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 TRPV5Q9NQA5 729 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 CYLDQ9NQC7 956 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 FAM207AQ9NSI2 230 aaPredicted RBP13.87□□□□□ -0.19
HDAC8-210ENST00000412342 CYTH4Q9UIA0 394 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 PCDHGC3Q9UN70 934 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 DAAM1Q9Y4D1 1078 aa13.87□□□□□ -0.19
HDAC8-210ENST00000412342 A0A1W2PQH9 124 aa13.86□□□□□ -0.19
HDAC8-210ENST00000412342 CHADO15335 359 aa13.86□□□□□ -0.19
HDAC8-210ENST00000412342 THAP12O43422 761 aa13.86□□□□□ -0.19
HDAC8-210ENST00000412342 GDI1P31150 447 aa13.86□□□□□ -0.19
HDAC8-210ENST00000412342 USP8P40818 1118 aa13.86□□□□□ -0.19
HDAC8-210ENST00000412342 PDE6CP51160 858 aa13.86□□□□□ -0.19
HDAC8-210ENST00000412342 SLC8A3P57103 927 aa13.86□□□□□ -0.19
HDAC8-210ENST00000412342 POLR2FP61218 127 aaKnown RBP13.86□□□□□ -0.19
HDAC8-210ENST00000412342 ADIGQ0VDE8 80 aa13.86□□□□□ -0.19
HDAC8-210ENST00000412342 RAPGEF1Q13905 1077 aa13.86□□□□□ -0.19
HDAC8-210ENST00000412342 HECTD3Q5T447 861 aa13.86□□□□□ -0.19
HDAC8-210ENST00000412342 SCML4Q8N228 414 aa13.86□□□□□ -0.19
HDAC8-210ENST00000412342 ZNF276Q8N554 614 aa13.86□□□□□ -0.19
HDAC8-210ENST00000412342 WDTC1Q8N5D0 677 aa13.86□□□□□ -0.19
HDAC8-210ENST00000412342 DNASE1L2Q92874 299 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms