RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 ABCG1P45844 678 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 ANAPC15P60006 121 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 GTF2BQ00403 316 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 TMEM119Q4V9L6 283 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 C10orf76Q5T2E6 689 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 FAM171BQ6P995 826 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 ADGRF2Q8IZF7 708 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 MYCT1Q8N699 235 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 NAT16Q8N8M0 369 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 C1orf127Q8N9H9 656 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 KCNV2Q8TDN2 545 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 MYLPFQ96A32 169 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 ERLEC1Q96DZ1 483 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 FAM84AQ96KN4 292 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 ZDHHC5Q9C0B5 715 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 SLC6A17Q9H1V8 727 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 IKZF4Q9H2S9 585 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 IL21RQ9HBE5 538 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 PARVGQ9HBI0 331 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 AGAP1Q9UPQ3 857 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 STYXL1Q9Y6J8 313 aa13.74□□□□□ -0.21
CHRNA1-203ENST00000409219 PTPRQQ9UMZ3 2332 aa13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 ATP2C2O75185 946 aa13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 TULP3O75386 442 aa13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 FAM13AO94988 1023 aa13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 ATXN1LP0C7T5 689 aaKnown RBP13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 PCSK1P29120 753 aa13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 PSMC1P62191 440 aaKnown RBP13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 POU5F1Q01860 360 aaKnown RBP13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 GAD2Q05329 585 aa13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 SYCP2LQ5T4T6 812 aa13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 EGFLAMQ63HQ2 1017 aa13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 VSTM1Q6UX27 236 aa13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 C4orf50Q6ZRC1 276 aa13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 GPBP1Q86WP2 473 aa13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 CXorf38Q8TB03 319 aa13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 PIP4K2CQ8TBX8 421 aa13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 IPO4Q8TEX9 1081 aaKnown RBP13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 SETD7Q8WTS6 366 aaKnown RBP13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 ACOX2Q99424 681 aa13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 SNX9Q9Y5X1 595 aa13.73□□□□□ -0.21
CHRNA1-203ENST00000409219 TRIM24O15164 1050 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 ATXN7O15265 892 aaPredicted RBP13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 HOXC11O43248 304 aaPredicted RBP13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 NDUFS2O75306 463 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 IL18RAPO95256 599 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 ZNF883P0CG24 379 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 BDNFP23560 247 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 LHX1P48742 406 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 TFAMQ00059 246 aaKnown RBP13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 WDR45BQ5MNZ6 344 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 ZCCHC9Q8N567 271 aaKnown RBP13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 TOP6BLQ8N6T0 577 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 LRRC52Q8N7C0 313 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 FOXJ1Q92949 421 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 CDK5RAP3Q96JB5 506 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 ZFRQ96KR1 1074 aaKnown RBP13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 CEP295NLQ96MC4 621 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 DCBLD2Q96PD2 775 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 SYT15Q9BQS2 421 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 CRTAC1Q9NQ79 661 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 TM7SF3Q9NS93 570 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 GDAP2Q9NXN4 497 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 TBC1D14Q9P2M4 693 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 DEC1Q9P2X7 70 aa13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 MAGEC2Q9UBF1 373 aaPredicted RBP13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 FNDC3AQ9Y2H6 1198 aaKnown RBP13.72□□□□□ -0.21
CHRNA1-203ENST00000409219 A0A1B0GTW7 788 aa13.71□□□□□ -0.21
CHRNA1-203ENST00000409219 FAM149AA5PLN7 773 aa13.71□□□□□ -0.21
CHRNA1-203ENST00000409219 CILPO75339 1184 aa13.71□□□□□ -0.21
CHRNA1-203ENST00000409219 ABL1P00519 1130 aa13.71□□□□□ -0.21
CHRNA1-203ENST00000409219 MBL2P11226 248 aaPredicted RBP13.71□□□□□ -0.21
CHRNA1-203ENST00000409219 PLCG1P19174 1290 aa13.71□□□□□ -0.21
CHRNA1-203ENST00000409219 GRIK1P39086 918 aa13.71□□□□□ -0.21
CHRNA1-203ENST00000409219 NOP14P78316 857 aaKnown RBP13.71□□□□□ -0.21
CHRNA1-203ENST00000409219 BNC1Q01954 994 aa13.71□□□□□ -0.21
CHRNA1-203ENST00000409219 SOWAHAQ2M3V2 549 aa13.71□□□□□ -0.21
CHRNA1-203ENST00000409219 SLFN12LQ6IEE8 588 aa13.71□□□□□ -0.21
CHRNA1-203ENST00000409219 DDX42Q86XP3 938 aaKnown RBP eCLIP13.71□□□□□ -0.21
CHRNA1-203ENST00000409219 GALNT15Q8N3T1 639 aa13.71□□□□□ -0.21
CHRNA1-203ENST00000409219 DNASE2BQ8WZ79 361 aa13.71□□□□□ -0.21
CHRNA1-203ENST00000409219 MRGPRX1Q96LB2 322 aa13.71□□□□□ -0.21
CHRNA1-203ENST00000409219 GAREM1Q9H706 876 aa13.71□□□□□ -0.21
CHRNA1-203ENST00000409219 STARD13Q9Y3M8 1113 aa13.71□□□□□ -0.21
CHRNA1-203ENST00000409219 TMEM131Q92545 1883 aa13.71□□□□□ -0.22
CHRNA1-203ENST00000409219 CABIN1Q9Y6J0 2220 aa13.71□□□□□ -0.22
CHRNA1-203ENST00000409219 E2F8A0AVK6 867 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 MEI4A8MW99 385 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 CER1O95813 267 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 LMO2P25791 158 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 ANXA13P27216 316 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 ITPKBP27987 946 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 ADSSP30520 456 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 PPP3CCP48454 512 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 DHX8Q14562 1220 aaKnown RBP13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 BTBD8Q5XKL5 378 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 DBX2Q6ZNG2 339 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 CCDC83Q8IWF9 413 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 BRSK2Q8IWQ3 736 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms