RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 TNFAIP3P21580 790 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 WNT3P56703 355 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 TAP2Q03519 686 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 EFR3AQ14156 821 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 FBXO47Q5MNV8 452 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 VWA1Q6PCB0 445 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 ZDHHC24Q6UX98 284 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 CLNKQ7Z7G1 428 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 YAF2Q8IY57 180 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 MPP5Q8N3R9 675 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 SUPT20HQ8NEM7 779 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 SPPL3Q8TCT6 385 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 OTUD7AQ8TE49 926 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 PDLIM2Q96JY6 352 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 DHX36Q9H2U1 1008 aaKnown RBP5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 XPNPEP3Q9NQH7 507 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 TBC1D23Q9NUY8 699 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 TBCCD1Q9NVR7 557 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 SCAF8Q9UPN6 1271 aaKnown RBP5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 CRYL1Q9Y2S2 319 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 TMX2Q9Y320 296 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 NEU2Q9Y3R4 380 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 ZNF785A8K8V0 405 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 PIP5K1BO14986 540 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 FAM155BO75949 473 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 TNFRSF6BO95407 300 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 CKMT1AP12532 417 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 EGR1P18146 543 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 ACVR2AP27037 513 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 PLA2G5P39877 138 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 VIPR2P41587 438 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 RXRGP48443 463 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 ZNF135P52742 658 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 RPS7P62081 194 aaKnown RBP5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 ZNF844Q08AG5 666 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 ZNF169Q14929 603 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 NPY5RQ15761 445 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 MAPKAPK3Q16644 382 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 ARHGAP15Q53QZ3 475 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 RETSATQ6NUM9 610 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 USP49Q70CQ1 688 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 MOGAT3Q86VF5 341 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 GAS2L3Q86XJ1 694 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 KRT73Q86Y46 540 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 COLGALT2Q8IYK4 626 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 AOPEPQ8N6M6 819 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 SIMC1Q8NDZ2 872 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 SLC30A5Q8TAD4 765 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 LPIN2Q92539 896 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 TMEM125Q96AQ2 219 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 AIFM2Q9BRQ8 373 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 GGA3Q9NZ52 723 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 XPR1Q9UBH6 696 aa5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 SRP68Q9UHB9 627 aaKnown RBP5.72□□□□□ -1.49
HMGB1P13-201ENST00000406019 KAT6BQ8WYB5 2073 aa5.71□□□□□ -1.49
HMGB1P13-201ENST00000406019 TRGV11A0A075B6L2 103 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 A0A0B4J269 797 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 INMTO95050 263 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 HNRNPMP52272 730 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 PNLIPRP1P54315 467 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 NANOS3P60323 173 aaKnown RBP5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 SIM1P81133 766 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 MPP1Q00013 466 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 SF3B3Q15393 1217 aaKnown RBP5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 CD300EQ496F6 205 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 AMOTQ4VCS5 1084 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 FCRL6Q6DN72 434 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 TMTC1Q8IUR5 882 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 CCDC150Q8NCX0 1101 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 UBE2Q2Q8WVN8 375 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 ASB12Q8WXK4 309 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 PTCD3Q96EY7 689 aaKnown RBP5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 TRIB1Q96RU8 372 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 MESP1Q9BRJ9 268 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 FAM167BQ9BTA0 163 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 MS4A7Q9GZW8 240 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 SIK2Q9H0K1 926 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 SMOC2Q9H3U7 446 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 HEYLQ9NQ87 328 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 INTS13Q9NVM9 706 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 DKK4Q9UBT3 224 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 TESQ9UGI8 421 aaKnown RBP5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 TMEM98Q9Y2Y6 226 aa5.71□□□□□ -1.5
HMGB1P13-201ENST00000406019 LOC102723971A0A1B0GUV8 181 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 WDR27A2RRH5 827 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 TISP43B9A030 160 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 B9A039 149 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 M0QYG6 137 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 MYO1CO00159 1063 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 CCP110O43303 1012 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 ASNA1O43681 348 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 RASSF9O75901 435 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 CYP2C9P11712 490 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 IDEP14735 1019 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 NPPBP16860 134 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 BMP5P22003 454 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 CST5P28325 142 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 POLE2P56282 527 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 PIGFQ07326 219 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms