RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 C2CD6Q53TS8 623 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 CYP4A22Q5TCH4 519 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 TOGARAM2Q6ZUX3 1019 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 MON1BQ7L1V2 547 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 VN1R2Q8NFZ6 395 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 CTNNBL1Q8WYA6 563 aaPredicted RBP16.55■□□□□ 0.24
CDPF1-204ENST00000404744 ZNF653Q96CK0 615 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 PRKD2Q9BZL6 878 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 CHD7Q9P2D1 2997 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 PCDHA13Q9Y5I0 950 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 USP3Q9Y6I4 520 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 ATG2AQ2TAZ0 1938 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 MYO9BQ13459 2157 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 ANKRD62A6NC57 917 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 HOXB8P17481 243 aaPredicted RBP16.55■□□□□ 0.24
CDPF1-204ENST00000404744 GALCP54803 685 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 GPC5P78333 572 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 MRPS5P82675 430 aaKnown RBP16.55■□□□□ 0.24
CDPF1-204ENST00000404744 ANKRD54Q6NXT1 300 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 KIAA1328Q86T90 577 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 DNAAF5Q86Y56 855 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 C12orf76Q8N812 135 aaPredicted RBP16.55■□□□□ 0.24
CDPF1-204ENST00000404744 PDZD8Q8NEN9 1154 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 CMASQ8NFW8 434 aaPredicted RBP16.55■□□□□ 0.24
CDPF1-204ENST00000404744 CORO1BQ9BR76 489 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 SELENOOQ9BVL4 669 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 ASAH2Q9NR71 780 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 MYO1AQ9UBC5 1043 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 TJP2Q9UDY2 1190 aa16.55■□□□□ 0.24
CDPF1-204ENST00000404744 MTCL1Q9Y4B5 1905 aaKnown RBP16.54■□□□□ 0.24
CDPF1-204ENST00000404744 GOLGA8SH3BPF8 625 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 PAPSS1O43252 624 aaPredicted RBP16.54■□□□□ 0.24
CDPF1-204ENST00000404744 USP46P62068 366 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 SLC6A3Q01959 620 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 TAF10Q12962 218 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 SKIV2LQ15477 1246 aaKnown RBP16.54■□□□□ 0.24
CDPF1-204ENST00000404744 CCDC85BQ15834 202 aaPredicted RBP16.54■□□□□ 0.24
CDPF1-204ENST00000404744 PABPC1LQ4VXU2 614 aaKnown RBP16.54■□□□□ 0.24
CDPF1-204ENST00000404744 EFHC1Q5JVL4 640 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 RARS2Q5T160 578 aaKnown RBP16.54■□□□□ 0.24
CDPF1-204ENST00000404744 PM20D1Q6GTS8 502 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 DNAJC24Q6P3W2 148 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 TMC5Q6UXY8 1006 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 FAM183BPQ6ZVS7 135 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 PHLDB2Q86SQ0 1253 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 XYLT1Q86Y38 959 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 SCML4Q8N228 414 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 ARHGAP18Q8N392 663 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 ACRBPQ8NEB7 543 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 IRGQQ8WZA9 623 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 SMG7Q92540 1137 aaKnown RBP16.54■□□□□ 0.24
CDPF1-204ENST00000404744 FAM149B1Q96BN6 582 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 PABPC5Q96DU9 382 aaKnown RBP16.54■□□□□ 0.24
CDPF1-204ENST00000404744 TRMT2BQ96GJ1 504 aaKnown RBP16.54■□□□□ 0.24
CDPF1-204ENST00000404744 GCNAQ96QF7 691 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 TTLL2Q9BWV7 592 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 KCNF1Q9H3M0 494 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 MTMR10Q9NXD2 777 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 IL37Q9NZH6 218 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 CNOT8Q9UFF9 292 aaKnown RBP16.54■□□□□ 0.24
CDPF1-204ENST00000404744 INTUQ9ULD6 942 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 NENFQ9UMX5 172 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 SCML2Q9UQR0 700 aa16.54■□□□□ 0.24
CDPF1-204ENST00000404744 ZNF263O14978 683 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 GABBR2O75899 941 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 FGF19O95750 216 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 GLP2RO95838 553 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 ABL1P00519 1130 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 POU2F2P09086 479 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 TMEM253P0C7T8 217 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 HMGA1P17096 107 aaKnown RBP16.53■□□□□ 0.24
CDPF1-204ENST00000404744 PPP3CCP48454 512 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 DAOAP59103 153 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 PTP4A2Q12974 167 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 FAM102AQ5T9C2 384 aaPredicted RBP16.53■□□□□ 0.24
CDPF1-204ENST00000404744 CES5AQ6NT32 575 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 PDZD4Q76G19 769 aaPredicted RBP16.53■□□□□ 0.24
CDPF1-204ENST00000404744 MON1AQ86VX9 555 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 LEMD2Q8NC56 503 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 PPM1EQ8WY54 764 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 OVCA2Q8WZ82 227 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 MYRFLQ96LU7 910 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 GUCD1Q96NT3 240 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 DESI2Q9BSY9 194 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 THAP2Q9H0W7 228 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 MRPL47Q9HD33 250 aaKnown RBP16.53■□□□□ 0.24
CDPF1-204ENST00000404744 TLR8Q9NR97 1041 aaKnown RBP16.53■□□□□ 0.24
CDPF1-204ENST00000404744 PARVAQ9NVD7 372 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 TRPM5Q9NZQ8 1165 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 CHORDC1Q9UHD1 332 aaPredicted RBP16.53■□□□□ 0.24
CDPF1-204ENST00000404744 SCINQ9Y6U3 715 aa16.53■□□□□ 0.24
CDPF1-204ENST00000404744 MYO7AQ13402 2215 aa16.52■□□□□ 0.24
CDPF1-204ENST00000404744 CCDC175P0C221 793 aa16.52■□□□□ 0.24
CDPF1-204ENST00000404744 MYL4P12829 197 aa16.52■□□□□ 0.24
CDPF1-204ENST00000404744 RRM1P23921 792 aa16.52■□□□□ 0.24
CDPF1-204ENST00000404744 PSEN1P49768 467 aa16.52■□□□□ 0.24
CDPF1-204ENST00000404744 YWHAGP61981 247 aaKnown RBP eCLIP16.52■□□□□ 0.24
CDPF1-204ENST00000404744 BTBD8Q5XKL5 378 aa16.52■□□□□ 0.24
CDPF1-204ENST00000404744 C3orf20Q8ND61 904 aa16.52■□□□□ 0.24
CDPF1-204ENST00000404744 CLEC4CQ8WTT0 213 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms