RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 ZNF358Q9NW07 568 aa12.27□□□□□ -0.45
ITSN1-211ENST00000399355 UBP1Q9NZI7 540 aa12.27□□□□□ -0.45
ITSN1-211ENST00000399355 BRCA1P38398 1863 aaKnown RBP12.27□□□□□ -0.45
ITSN1-211ENST00000399355 CFAP69A5D8W1 941 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 TAF1BQ53T94 588 aaPredicted RBP12.26□□□□□ -0.45
ITSN1-211ENST00000399355 ENOSF1Q7L5Y1 443 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 KDELC2Q7Z4H8 507 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 ALYREFQ86V81 257 aaKnown RBP12.26□□□□□ -0.45
ITSN1-211ENST00000399355 RIOX2Q8IUF8 465 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 CXorf38Q8TB03 319 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 SLC35B2Q8TB61 432 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 FAM172AQ8WUF8 416 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 CLPTM1LQ96KA5 538 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 C12orf42Q96LP6 360 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 RUNDC3BQ96NL0 473 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 SCINQ9Y6U3 715 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 CFAP54Q96N23 3096 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 FAM237BA0A1B0GVD1 139 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 ACKR2O00590 384 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 PMM2O15305 246 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 SOWAHAQ2M3V2 549 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 CCDC62Q6P9F0 684 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 POLNQ7Z5Q5 900 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 VSIG1Q86XK7 387 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 APOBEC3FQ8IUX4 373 aaKnown RBP12.26□□□□□ -0.45
ITSN1-211ENST00000399355 DHX35Q9H5Z1 703 aaKnown RBP12.26□□□□□ -0.45
ITSN1-211ENST00000399355 NUDT5Q9UKK9 219 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 LTBP3Q9NS15 1303 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 MYO7AQ13402 2215 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 OAS1P00973 400 aaKnown RBP12.26□□□□□ -0.45
ITSN1-211ENST00000399355 TBXAS1P24557 533 aaPredicted RBP12.26□□□□□ -0.45
ITSN1-211ENST00000399355 YARSP54577 528 aaKnown RBP12.26□□□□□ -0.45
ITSN1-211ENST00000399355 NEDD9Q14511 834 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 ATG14Q6ZNE5 492 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 RCOR2Q8IZ40 523 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 PCDH19Q8TAB3 1148 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 DTX3LQ8TDB6 740 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 FAM149B1Q96BN6 582 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 TMEM176AQ96HP8 235 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 SHROOM3Q8TF72 1996 aa12.26□□□□□ -0.45
ITSN1-211ENST00000399355 F8W810 466 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 KCNK1O00180 336 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 EDNRBP24530 442 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 FAM160B1Q5W0V3 765 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 N4BP2L2Q92802 583 aaPredicted RBP12.25□□□□□ -0.45
ITSN1-211ENST00000399355 FAF2Q96CS3 445 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 SMC6Q96SB8 1091 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 ZC3H11AO75152 810 aaKnown RBP eCLIP12.25□□□□□ -0.45
ITSN1-211ENST00000399355 AMPD1P23109 780 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 RPS12P25398 132 aaKnown RBP12.25□□□□□ -0.45
ITSN1-211ENST00000399355 SOX4Q06945 474 aaPredicted RBP12.25□□□□□ -0.45
ITSN1-211ENST00000399355 TCEAL1Q15170 157 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 PPP2R5EQ16537 467 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 CCDC14Q49A88 953 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 SLC25A41Q8N5S1 370 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 RDM1Q8NG50 284 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 GRK7Q8WTQ7 553 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 ATP2A3Q93084 1043 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 PAAF1Q9BRP4 392 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 EME2A4GXA9 379 aaPredicted RBP12.25□□□□□ -0.45
ITSN1-211ENST00000399355 PAPSS1O43252 624 aaPredicted RBP12.25□□□□□ -0.45
ITSN1-211ENST00000399355 T-ENOLP0DO92 83 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 SESN2P58004 480 aaPredicted RBP12.25□□□□□ -0.45
ITSN1-211ENST00000399355 RTP1P59025 263 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 ARHGAP1Q07960 439 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 DPYSL3Q14195 570 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 HHATQ5VTY9 493 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 CASC4Q6P4E1 433 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 PQLC3Q8N755 202 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 NSMCE1Q8WV22 266 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 CLEC11AQ9Y240 323 aa12.25□□□□□ -0.45
ITSN1-211ENST00000399355 LYPLA1O75608 230 aaPredicted RBP12.24□□□□□ -0.45
ITSN1-211ENST00000399355 LDHAP00338 332 aaKnown RBP12.24□□□□□ -0.45
ITSN1-211ENST00000399355 CXCR3P49682 368 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 NR1H3Q13133 447 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 IER5Q5VY09 327 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 DENND5BQ6ZUT9 1274 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 HFE2Q6ZVN8 426 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 NAT8LQ8N9F0 302 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 DNERQ8NFT8 737 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 SNRNP25Q9BV90 132 aaKnown RBP12.24□□□□□ -0.45
ITSN1-211ENST00000399355 FZD8Q9H461 694 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 DPP3Q9NY33 737 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.24□□□□□ -0.45
ITSN1-211ENST00000399355 FARP1Q9Y4F1 1045 aaPredicted RBP12.24□□□□□ -0.45
ITSN1-211ENST00000399355 TTLL3Q9Y4R7 772 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 PSAT1Q9Y617 370 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 H3BRB1 525 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 CILPO75339 1184 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 SUN1O94901 812 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 CSH1P0DML2 217 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 CSH2P0DML3 217 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 GOT1P17174 413 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 TKTP29401 623 aaKnown RBP12.24□□□□□ -0.45
ITSN1-211ENST00000399355 NME3Q13232 169 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 XRCC4Q13426 336 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 MOGSQ13724 837 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 KRT81Q14533 505 aa12.24□□□□□ -0.45
ITSN1-211ENST00000399355 YTHDF3Q7Z739 585 aaKnown RBP12.24□□□□□ -0.45
ITSN1-211ENST00000399355 PLD5Q8N7P1 536 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms