RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 JADE3Q92613 823 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 RUSC1Q9BVN2 902 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 SHCBP1LQ9BZQ2 653 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 PLA2G4CQ9UP65 541 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 DTNAQ9Y4J8 743 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 TLL1O43897 1013 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 CHN1P15882 459 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 NCALDP61601 193 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 LAYNQ6UX15 382 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 SYDE1Q6ZW31 735 aaPredicted RBP14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 USP49Q70CQ1 688 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 C10orf53Q8N6V4 93 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 ZNF555Q8NEP9 628 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 AIM2O14862 343 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 POLBP06746 335 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 FAXCQ5TGI0 409 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 SPATA21Q7Z572 469 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 PHF21AQ96BD5 680 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 PGLYRP2Q96PD5 576 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 MRPL1Q9BYD6 325 aaKnown RBP14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 CELF4Q9BZC1 486 aaKnown RBP14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 YIPF3Q9GZM5 350 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 SPASTQ9UBP0 616 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 ERVK-10P10266 1014 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 PLA2G4AP47712 749 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 UGP2Q16851 508 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 RABGAP1LQ5R372 815 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 CES5AQ6NT32 575 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 OSBPL1AQ9BXW6 950 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 THG1LQ9NWX6 298 aaKnown RBP14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 CDYLQ9Y232 598 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 KRT87PA6NCN2 255 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 RHOBTB3O94955 611 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 MRPS6P82932 125 aaKnown RBP14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 PPM1LQ5SGD2 360 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 CYGBQ8WWM9 190 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 ZNF556Q9HAH1 456 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 NCF1BA6NI72 391 aaPredicted RBP14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 NCF1CA8MVU1 366 aaPredicted RBP14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 TSPAN3O60637 253 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 INHAP05111 366 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 NCF1P14598 390 aaPredicted RBP14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 PTPN7P35236 360 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 HDAC4P56524 1084 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 GRIN1Q05586 938 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 SGF29Q96ES7 293 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 TSEN34Q9BSV6 310 aaKnown RBP14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 OSBPL8Q9BZF1 889 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 PSD3Q9NYI0 1048 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 PSMC3IPQ9P2W1 217 aaPredicted RBP14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 STX7O15400 261 aaKnown RBP14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 MED24O75448 989 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 CARSP49589 748 aaKnown RBP14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 MED21Q13503 144 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 PWP1Q13610 501 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 TERF2Q15554 542 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 CHMP1BQ7LBR1 199 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 PPP1R13LQ8WUF5 828 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 INPP5DQ92835 1189 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 FAM136AQ96C01 138 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 ATXN3LQ9H3M9 355 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 FBXO10Q9UK96 956 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 CHUKO15111 745 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 MAN1A2O60476 641 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 KCNJ1P48048 391 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 PMS1P54277 932 aaKnown RBP14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 PLIN5Q00G26 463 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 LAMB3Q13751 1172 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 LLGL2Q6P1M3 1020 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 TNS4Q8IZW8 715 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 COPS5Q92905 334 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 ADAM2Q99965 735 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 PCDHB2Q9Y5E7 798 aa14.75□□□□□ -0.05
PCDHA11-201ENST00000398640 hCG_2014768A0A024R1R8 64 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 IMPDH2P12268 514 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 DARSP14868 501 aaKnown RBP14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 UBA1P22314 1058 aaKnown RBP14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 MROH9Q5TGP6 573 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 RASGRP2Q7LDG7 609 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 FTHL17Q9BXU8 183 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 ASTN2O75129 1339 aaPredicted RBP14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 SRP72O76094 671 aaKnown RBP14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 HIST2H2ACQ16777 129 aaPredicted RBP14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 C2CD6Q53TS8 623 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 HIST2H2AA3Q6FI13 130 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 CLEC17AQ6ZS10 378 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 KAT2BQ92831 832 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 ZNF558Q96NG5 402 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 RSAD1Q9HA92 442 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 SNTG2Q9NY99 539 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 PAK5Q9P286 719 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 CDY2AQ9Y6F7 541 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 CNTNAP2Q9UHC6 1331 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 H2AFYO75367 372 aaKnown RBP14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 PTGER2P43116 358 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 OXCT1P55809 520 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 STARD3Q14849 445 aa14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 LRRC23Q53EV4 343 aaPredicted RBP14.74□□□□□ -0.05
PCDHA11-201ENST00000398640 DENND5BQ6ZUT9 1274 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms