RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 AVENQ9NQS1 362 aaPredicted RBP13.22□□□□□ -0.29
CCBE1-201ENST00000398179 SCN3BQ9NY72 215 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 SLC35F4A4IF30 521 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 RHPN2P1A8MT19 583 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 NET1Q7Z628 596 aaPredicted RBP13.22□□□□□ -0.29
CCBE1-201ENST00000398179 NYXQ9GZU5 481 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 ABCB9Q9NP78 766 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 EXOGQ9Y2C4 368 aaKnown RBP13.22□□□□□ -0.29
CCBE1-201ENST00000398179 H3BRB1 525 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 STX10O60499 249 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 USP12O75317 370 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 NR1I2O75469 434 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 POU2F1P14859 743 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 GRB14Q14449 540 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 LRIG3Q6UXM1 1119 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 FCGR1BQ92637 280 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 PUS3Q9BZE2 481 aaKnown RBP13.22□□□□□ -0.29
CCBE1-201ENST00000398179 DGKBQ9Y6T7 804 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 OAZ2O95190 189 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 STAT5BP51692 787 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 NR1H2P55055 460 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 PMPCAQ10713 525 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 TBX2Q13207 712 aaPredicted RBP13.22□□□□□ -0.29
CCBE1-201ENST00000398179 RPS6KA2Q15349 733 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 TRIQKQ629K1 86 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 KRT39Q6A163 491 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 AFTPHQ6ULP2 937 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 TRIM72Q6ZMU5 477 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 PRUNE1Q86TP1 453 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 SEMA6DQ8NFY4 1073 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 SAMSN1Q9NSI8 373 aaKnown RBP13.22□□□□□ -0.29
CCBE1-201ENST00000398179 CXXC1Q9P0U4 656 aaPredicted RBP13.22□□□□□ -0.29
CCBE1-201ENST00000398179 HERC5Q9UII4 1024 aaKnown RBP13.22□□□□□ -0.29
CCBE1-201ENST00000398179 CAMSAP2Q08AD1 1489 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 AIPO00170 330 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 FKBP6O75344 327 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 PLEKP08567 350 aaPredicted RBP13.22□□□□□ -0.29
CCBE1-201ENST00000398179 RPS17P08708 135 aaKnown RBP13.22□□□□□ -0.29
CCBE1-201ENST00000398179 MYBPC1Q00872 1141 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 KBTBD6Q86V97 674 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 CCDC33Q8N5R6 958 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 FNIP1Q8TF40 1166 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 OR2B2Q9GZK3 357 aa13.22□□□□□ -0.29
CCBE1-201ENST00000398179 PER2O15055 1255 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 GPC4O75487 556 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 GDF11O95390 407 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 HK1P19367 917 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 GP5P40197 560 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 C1orf189Q5VU69 101 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 STOX1Q6ZVD7 989 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 TAMM41Q96BW9 452 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 LRFN1Q9P244 771 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 GNPTGQ9UJJ9 305 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 KIF14Q15058 1648 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 SH3TC1Q8TE82 1336 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 CLOCKO15516 846 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 SRP72O76094 671 aaKnown RBP13.21□□□□□ -0.29
CCBE1-201ENST00000398179 CD2P06729 351 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 YES1P07947 543 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 HSD17B2P37059 387 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 DSC3Q14574 896 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 FASTKD1Q53R41 847 aaKnown RBP13.21□□□□□ -0.29
CCBE1-201ENST00000398179 PALB2Q86YC2 1186 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 OR8H3Q8N146 312 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 PANX2Q96RD6 677 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 CGREF1Q99674 301 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 NLRC4Q9NPP4 1024 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 TOR4AQ9NXH8 423 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 NYAP2Q9P242 653 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 AMFRQ9UKV5 643 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 ISPDA4D126 451 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 DGKIO75912 1065 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 TRAF3Q13114 568 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 TRIP10Q15642 601 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 RABGAP1LQ5R372 815 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 C12orf56Q8IXR9 622 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 SDHAF2Q9NX18 166 aa13.21□□□□□ -0.29
CCBE1-201ENST00000398179 ORC2Q13416 577 aaPredicted RBP13.21□□□□□ -0.3
CCBE1-201ENST00000398179 IMPG1Q17R60 797 aa13.21□□□□□ -0.3
CCBE1-201ENST00000398179 FGD2Q7Z6J4 655 aa13.21□□□□□ -0.3
CCBE1-201ENST00000398179 FANK1Q8TC84 345 aa13.21□□□□□ -0.3
CCBE1-201ENST00000398179 CDADC1Q9BWV3 514 aa13.21□□□□□ -0.3
CCBE1-201ENST00000398179 NMRK1Q9NWW6 199 aa13.21□□□□□ -0.3
CCBE1-201ENST00000398179 PADI4Q9UM07 663 aa13.21□□□□□ -0.3
CCBE1-201ENST00000398179 KDM2BQ8NHM5 1336 aa13.21□□□□□ -0.3
CCBE1-201ENST00000398179 SAGE2PA6NJ88 616 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 WFS1O76024 890 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 HLA-DOAP06340 250 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 LSP1P33241 339 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 SRP54P61011 504 aaKnown RBP13.2□□□□□ -0.3
CCBE1-201ENST00000398179 CAMK1Q14012 370 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 MAPK11Q15759 364 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 FRMD7Q6ZUT3 714 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 ALG5Q9Y673 324 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 GSTA4O15217 222 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 MAPKAPK3Q16644 382 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 GPATCH4Q5T3I0 446 aaKnown RBP13.2□□□□□ -0.3
CCBE1-201ENST00000398179 LHFPL3Q86UP9 236 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 CHAC2Q8WUX2 184 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 NAT14Q8WUY8 206 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms