RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 AUHQ13825 339 aaKnown RBP15.63■□□□□ 0.09
CBX3-202ENST00000396386 KYNUQ16719 465 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 RAB6CQ53S08 254 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 PCGF5Q86SE9 256 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 SERINC5Q86VE9 423 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 OSTM1Q86WC4 334 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 MAP7D3Q8IWC1 876 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 B3GALNT2Q8NCR0 500 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 SLC2A14Q8TDB8 520 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.63■□□□□ 0.09
CBX3-202ENST00000396386 KHSRPQ92945 711 aaKnown RBP eCLIP15.63■□□□□ 0.092e-6■■□□□ 13.8
CBX3-202ENST00000396386 SERPINB12Q96P63 405 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 RAB6CQ9H0N0 254 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 CHST12Q9NRB3 414 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 ST3GAL5Q9UNP4 418 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 ATP5DP30049 168 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 MAGEA4P43358 317 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 MMRN1Q13201 1228 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 LONRF1Q17RB8 773 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 BOLA3Q53S33 107 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 SCYL2Q6P3W7 929 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 TAOK1Q7L7X3 1001 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 VSIG1Q86XK7 387 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 WNT8BQ93098 351 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 HSFY1Q96LI6 401 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 ZFP42Q96MM3 310 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 TTC25Q96NG3 672 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 SELENOSQ9BQE4 189 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 B3GNT5Q9BYG0 378 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 RABEP2Q9H5N1 569 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 SAYSD1Q9NPB0 183 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.63■□□□□ 0.09
CBX3-202ENST00000396386 NDUFAB1O14561 156 aa15.62■□□□□ 0.09
CBX3-202ENST00000396386 CYB561D2O14569 222 aa15.62■□□□□ 0.09
CBX3-202ENST00000396386 XPO1O14980 1071 aaKnown RBP15.62■□□□□ 0.09
CBX3-202ENST00000396386 MDM4O15151 490 aa15.62■□□□□ 0.09
CBX3-202ENST00000396386 TCEA3O75764 348 aa15.62■□□□□ 0.09
CBX3-202ENST00000396386 FAM163BP0C2L3 166 aa15.62■□□□□ 0.09
CBX3-202ENST00000396386 LCP1P13796 627 aa15.62■□□□□ 0.09
CBX3-202ENST00000396386 TKTP29401 623 aaKnown RBP15.62■□□□□ 0.09
CBX3-202ENST00000396386 MLH1P40692 756 aa15.62■□□□□ 0.09
CBX3-202ENST00000396386 ROR1Q01973 937 aa15.62■□□□□ 0.09
CBX3-202ENST00000396386 PRKCZQ05513 592 aa15.62■□□□□ 0.09
CBX3-202ENST00000396386 MGAT3Q09327 533 aa15.62■□□□□ 0.09
CBX3-202ENST00000396386 NOMO1Q15155 1222 aa15.62■□□□□ 0.09
CBX3-202ENST00000396386 TNFAIP8L3Q5GJ75 292 aa15.62■□□□□ 0.09
CBX3-202ENST00000396386 ARCQ7LC44 396 aa15.62■□□□□ 0.09
CBX3-202ENST00000396386 PRCCQ92733 491 aaPredicted RBP15.62■□□□□ 0.09
CBX3-202ENST00000396386 C9orf72Q96LT7 481 aa15.62■□□□□ 0.09
CBX3-202ENST00000396386 SNRNP25Q9BV90 132 aaKnown RBP15.62■□□□□ 0.09
CBX3-202ENST00000396386 XPNPEP3Q9NQH7 507 aa15.62■□□□□ 0.09
CBX3-202ENST00000396386 ADAMTS4O75173 837 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 ALDH1A1P00352 501 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 CHRNA1P02708 482 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 RBP3P10745 1247 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 MMP13P45452 471 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 CCT5P48643 541 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 CTCFP49711 727 aaPredicted RBP15.61■□□□□ 0.09
CBX3-202ENST00000396386 GDF10P55107 478 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 SLC8A3P57103 927 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 IFI35P80217 286 aaPredicted RBP15.61■□□□□ 0.09
CBX3-202ENST00000396386 HTRA3P83110 453 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 RPAINQ86UA6 219 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 PPIL6Q8IXY8 311 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 SPATA18Q8TC71 538 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 CLEC4CQ8WTT0 213 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 RNF157Q96PX1 679 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 ZIC5Q96T25 663 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 PHACTR1Q9C0D0 580 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 PCDH18Q9HCL0 1135 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 GPATCH2LQ9NWQ4 482 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 RSPH14Q9UHP6 348 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 FARP1Q9Y4F1 1045 aaPredicted RBP15.61■□□□□ 0.09
CBX3-202ENST00000396386 ZNF487B1APH4 448 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 TDRD15B5MCY1 1934 aaKnown RBP15.61■□□□□ 0.09
CBX3-202ENST00000396386 E7EVH7 732 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 APOL1O14791 398 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 GPR182O15218 404 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 TGM2P21980 687 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 HDAC4P56524 1084 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 CACNB2Q08289 660 aaPredicted RBP15.61■□□□□ 0.09
CBX3-202ENST00000396386 TRIM32Q13049 653 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 STAT4Q14765 748 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 ZC3H12AQ5D1E8 599 aaKnown RBP15.61■□□□□ 0.09
CBX3-202ENST00000396386 CYP4F22Q6NT55 531 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 CENPUQ71F23 418 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 P3H4Q92791 437 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 HHIPL1Q96JK4 782 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 HNRNPABQ99729 332 aaKnown RBP15.61■□□□□ 0.09
CBX3-202ENST00000396386 CCDC77Q9BR77 488 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 ZNF670Q9BS34 389 aa15.61■□□□□ 0.09
CBX3-202ENST00000396386 C11orf84Q9BUA3 381 aaPredicted RBP15.61■□□□□ 0.09
CBX3-202ENST00000396386 TSPYL2Q9H2G4 693 aaPredicted RBP15.61■□□□□ 0.09
CBX3-202ENST00000396386 A0A087WUV0 522 aaPredicted RBP15.6■□□□□ 0.09
CBX3-202ENST00000396386 MEIS3P2A8K0S8 358 aa15.6■□□□□ 0.09
CBX3-202ENST00000396386 THP07101 528 aa15.6■□□□□ 0.09
CBX3-202ENST00000396386 RPL22P35268 128 aaKnown RBP15.6■□□□□ 0.09
CBX3-202ENST00000396386 WSCD1Q658N2 575 aa15.6■□□□□ 0.09
CBX3-202ENST00000396386 DARS2Q6PI48 645 aaKnown RBP15.6■□□□□ 0.09
CBX3-202ENST00000396386 NPNTQ6UXI9 565 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms