RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 DNAJB2P25686 324 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 PSMA2P25787 234 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 RFC1P35251 1148 aaPredicted RBP14.36□□□□□ -0.11
VAPB-202ENST00000395802 ZNF143P52747 638 aaPredicted RBP14.36□□□□□ -0.11
VAPB-202ENST00000395802 RPL7AP62424 266 aaKnown RBP14.36□□□□□ -0.11
VAPB-202ENST00000395802 PAPD7Q5XG87 772 aaKnown RBP14.36□□□□□ -0.11
VAPB-202ENST00000395802 PM20D1Q6GTS8 502 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 RSPO2Q6UXX9 243 aaPredicted RBP14.36□□□□□ -0.11
VAPB-202ENST00000395802 DENND5BQ6ZUT9 1274 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 NT5DC3Q86UY8 548 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 ARHGAP18Q8N392 663 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 FAM149B1Q96BN6 582 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 SEPT5Q99719 369 aaPredicted RBP14.36□□□□□ -0.11
VAPB-202ENST00000395802 TCF25Q9BQ70 676 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 POPDC2Q9HBU9 364 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 TJP2Q9UDY2 1190 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 TMEM59LQ9UK28 342 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 STAP1Q9ULZ2 295 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 USP3Q9Y6I4 520 aa14.36□□□□□ -0.11
VAPB-202ENST00000395802 HHLA1C9JL84 531 aa14.35□□□□□ -0.11
VAPB-202ENST00000395802 CAPN9O14815 690 aa14.35□□□□□ -0.11
VAPB-202ENST00000395802 SLU7O95391 586 aaKnown RBP14.35□□□□□ -0.11
VAPB-202ENST00000395802 CXCL14O95715 111 aa14.35□□□□□ -0.11
VAPB-202ENST00000395802 FTCDO95954 541 aa14.35□□□□□ -0.11
VAPB-202ENST00000395802 PDGFRAP16234 1089 aa14.35□□□□□ -0.11
VAPB-202ENST00000395802 COMTP21964 271 aa14.35□□□□□ -0.11
VAPB-202ENST00000395802 SLC5A3P53794 718 aa14.35□□□□□ -0.11
VAPB-202ENST00000395802 RNASE9P60153 205 aaKnown RBP14.35□□□□□ -0.11
VAPB-202ENST00000395802 DUSP4Q13115 394 aa14.35□□□□□ -0.11
VAPB-202ENST00000395802 PLD1Q13393 1074 aa14.35□□□□□ -0.11
VAPB-202ENST00000395802 CLUL1Q15846 466 aa14.35□□□□□ -0.11
VAPB-202ENST00000395802 HADHQ16836 314 aaKnown RBP14.35□□□□□ -0.11
VAPB-202ENST00000395802 BEND5Q7L4P6 421 aa14.35□□□□□ -0.11
VAPB-202ENST00000395802 POF1BQ8WVV4 589 aa14.35□□□□□ -0.11
VAPB-202ENST00000395802 CNPY3Q9BT09 278 aa14.35□□□□□ -0.11
VAPB-202ENST00000395802 RNF14Q9UBS8 474 aa14.35□□□□□ -0.11
VAPB-202ENST00000395802 CDC23Q9UJX2 597 aa14.35□□□□□ -0.11
VAPB-202ENST00000395802 HYOU1Q9Y4L1 999 aa14.35□□□□□ -0.11
VAPB-202ENST00000395802 CEP290O15078 2479 aa14.35□□□□□ -0.11
VAPB-202ENST00000395802 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.34□□□□□ -0.11
VAPB-202ENST00000395802 C2CD4BA6NLJ0 364 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 TMEM110-MUSTN1A8MSY1 372 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 H0YGN5 161 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 LILRB3O75022 631 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 RPL17P18621 184 aaKnown RBP14.34□□□□□ -0.11
VAPB-202ENST00000395802 MATKP42679 507 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 ALDH1A3P47895 512 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 PSEN1P49768 467 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 CACNA2D1P54289 1103 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 DAOAP59103 153 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 ERVK-21P61565 698 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 LLGL2Q6P1M3 1020 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 RTL10Q7L3V2 364 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 SPPL3Q8TCT6 385 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 MICAL1Q8TDZ2 1067 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 HES6Q96HZ4 224 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 RHOBTB2Q9BYZ6 727 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 ULBP1Q9BZM6 244 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.34□□□□□ -0.11
VAPB-202ENST00000395802 DPP7Q9UHL4 492 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 SNX12Q9UMY4 172 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 KIAA1671Q9BY89 1806 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 CES2O00748 559 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 DPYSL4O14531 572 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 PRRG1O14668 218 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 TNFRSF10BO14763 440 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 TEX28O15482 410 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 PSTPIP1O43586 416 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 USP17L7P0C7H9 530 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 NOS2P35228 1153 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 PTPN9P43378 593 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 VEPH1Q14D04 833 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 DDR2Q16832 855 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 ODF2Q5BJF6 829 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 LRRC38Q5VT99 294 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 CCDC149Q6ZUS6 474 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 RHOT1Q8IXI2 618 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 TCEAL8Q8IYN2 117 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 TDHQ8IZJ6 230 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 MRPL43Q8N983 215 aaKnown RBP14.34□□□□□ -0.11
VAPB-202ENST00000395802 LRRN4CLQ8ND94 238 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 RXFP2Q8WXD0 754 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 PBKQ96KB5 322 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 BTBD6Q96KE9 485 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 C17orf80Q9BSJ5 609 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 TLR10Q9BXR5 811 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 CYP4F11Q9HBI6 524 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 ALG13Q9NP73 1137 aaKnown RBP14.34□□□□□ -0.11
VAPB-202ENST00000395802 SLC27A5Q9Y2P5 690 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 PTPRDP23468 1912 aa14.34□□□□□ -0.11
VAPB-202ENST00000395802 NLRC5Q86WI3 1866 aa14.33□□□□□ -0.11
VAPB-202ENST00000395802 GRXCR1A8MXD5 290 aa14.33□□□□□ -0.12
VAPB-202ENST00000395802 DAB1O75553 588 aa14.33□□□□□ -0.12
VAPB-202ENST00000395802 KRT7P08729 469 aa14.33□□□□□ -0.12
VAPB-202ENST00000395802 KLRC2P26717 231 aa14.33□□□□□ -0.12
VAPB-202ENST00000395802 YWHAQP27348 245 aa14.33□□□□□ -0.12
VAPB-202ENST00000395802 PCK1P35558 622 aa14.33□□□□□ -0.12
VAPB-202ENST00000395802 TAF12Q16514 161 aa14.33□□□□□ -0.12
VAPB-202ENST00000395802 ELMSAN1Q6PJG2 1045 aa14.33□□□□□ -0.12
VAPB-202ENST00000395802 MON1AQ86VX9 555 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms