RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 C5orf42Q9H799 3197 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 NOTCH4Q99466 2003 aa6.62□□□□□ -1.35
PTPN20-208ENST00000395727 UBE4BO95155 1302 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 A0A087X0B3 334 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 PRRG1O14668 218 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 ZNF197O14709 1029 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 EIF3DO15371 548 aaKnown RBP eCLIP6.61□□□□□ -1.35
PTPN20-208ENST00000395727 CCL16O15467 120 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 NARSO43776 548 aaKnown RBP6.61□□□□□ -1.35
PTPN20-208ENST00000395727 CUTAO60888 179 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 SEC24AO95486 1093 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 VNN2O95498 520 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 RHOP08100 348 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 NFICP08651 508 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 ZSCAN22P10073 491 aaPredicted RBP6.61□□□□□ -1.35
PTPN20-208ENST00000395727 ELF1P32519 619 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 PNPLA4P41247 253 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 NBL1P41271 181 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 TAF6P49848 677 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 MRE11P49959 708 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 STARD6P59095 220 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 SNRPFP62306 86 aaKnown RBP6.61□□□□□ -1.35
PTPN20-208ENST00000395727 AMPD3Q01432 767 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 PFKPQ01813 784 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 PRKCQQ04759 706 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 STK38Q15208 465 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 SPECC1Q5M775 1068 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 C9orf57Q5W0N0 161 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 ADALQ6DHV7 355 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 OVOS1Q6IE37 1185 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 STXBP4Q6ZWJ1 553 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 DYMQ7RTS9 669 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 USP37Q86T82 979 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 HSCBQ8IWL3 235 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 BRSK2Q8IWQ3 736 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 CCDC65Q8IXS2 484 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 CCDC105Q8IYK2 499 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 ELMOD1Q8N336 334 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 LRRC52Q8N7C0 313 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 GPBAR1Q8TDU6 330 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 C2orf15Q8WU43 125 aaKnown RBP6.61□□□□□ -1.35
PTPN20-208ENST00000395727 TMEM174Q8WUU8 243 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 DNASE1L2Q92874 299 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 UTP4Q969X6 686 aaKnown RBP6.61□□□□□ -1.35
PTPN20-208ENST00000395727 ELSPBP1Q96BH3 223 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 BORCS6Q96GS4 357 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 SHDQ96IW2 340 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 ZNF560Q96MR9 790 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 PYM1Q9BRP8 204 aaKnown RBP6.61□□□□□ -1.35
PTPN20-208ENST00000395727 TRIM9Q9C026 710 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 GPR88Q9GZN0 384 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 MFSD1Q9H3U5 465 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 MRPL44Q9H9J2 332 aaKnown RBP6.61□□□□□ -1.35
PTPN20-208ENST00000395727 CYP4F11Q9HBI6 524 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 CBX8Q9HC52 389 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 ARHGEF3Q9NR81 526 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 RAD18Q9NS91 495 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 HCFC1R1Q9NWW0 138 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 KIAA1522Q9P206 1035 aaPredicted RBP6.61□□□□□ -1.35
PTPN20-208ENST00000395727 ZMYM5Q9UJ78 669 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 HIF3AQ9Y2N7 669 aa6.61□□□□□ -1.35
PTPN20-208ENST00000395727 MRPS23Q9Y3D9 190 aaKnown RBP6.61□□□□□ -1.35
PTPN20-208ENST00000395727 MTMR11A4FU01 709 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 TISP43B9A030 160 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 TMPRSS2O15393 492 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 SART1O43290 800 aaKnown RBP6.6□□□□□ -1.35
PTPN20-208ENST00000395727 GCNT3O95395 438 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 FGF19O95750 216 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 F13A1P00488 732 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 FURINP09958 794 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 FCARP24071 287 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 MAGEA9P43362 315 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 ACOT2P49753 483 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 CASP5P51878 434 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 MLLT6P55198 1093 aaPredicted RBP6.6□□□□□ -1.35
PTPN20-208ENST00000395727 NTHL1P78549 312 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 ADCY1Q08828 1119 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 SURF1Q15526 300 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 BMT2Q1RMZ1 405 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 SLC5A9Q2M3M2 681 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 SV2CQ496J9 727 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 IQCEQ6IPM2 695 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 CENPPQ6IPU0 288 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 SHC4Q6S5L8 630 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 PARM1Q6UWI2 310 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 DSTYKQ6XUX3 929 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 PRR23CQ6ZRP0 262 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 EPM2AIP1Q7L775 607 aaPredicted RBP6.6□□□□□ -1.35
PTPN20-208ENST00000395727 FAM20CQ8IXL6 584 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 EFCAB13Q8IY85 973 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 IQUBQ8NA54 791 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 CXorf38Q8TB03 319 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 ITFG1Q8TB96 612 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 SPPL2BQ8TCT7 592 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 LEO1Q8WVC0 666 aaPredicted RBP6.6□□□□□ -1.35
PTPN20-208ENST00000395727 RSAD2Q8WXG1 361 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 POMGNT1Q8WZA1 660 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 GAL3ST3Q96A11 431 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 E2F7Q96AV8 911 aa6.6□□□□□ -1.35
PTPN20-208ENST00000395727 SENP8Q96LD8 212 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms