RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 SCAMP3O14828 347 aaKnown RBP12.09□□□□□ -0.47
RTN1-203ENST00000395090 RTN2O75298 545 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 CALCAP01258 141 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 H2AFZP0C0S5 128 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 RAG1P15918 1043 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 GMPRP36959 345 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 NDST1P52848 882 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 ETF1P62495 437 aaKnown RBP12.09□□□□□ -0.47
RTN1-203ENST00000395090 ARHGAP29Q52LW3 1261 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 ZNF394Q53GI3 561 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 TAF3Q5VWG9 929 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 PSAPL1Q6NUJ1 521 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 H2AFVQ71UI9 128 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 COLGALT2Q8IYK4 626 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 CRYBG2Q8N1P7 616 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 RNF10Q8N5U6 811 aaKnown RBP12.09□□□□□ -0.47
RTN1-203ENST00000395090 C3orf58Q8NDZ4 430 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 APPL2Q8NEU8 664 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 URGCPQ8TCY9 931 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 C16orf45Q96MC5 204 aaPredicted RBP12.09□□□□□ -0.47
RTN1-203ENST00000395090 PAAF1Q9BRP4 392 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 NT5C1AQ9BXI3 368 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 PACSIN1Q9BY11 444 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 TBC1D13Q9NVG8 400 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 MYO1AQ9UBC5 1043 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 TRIM10Q9UDY6 481 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 INPP5FQ9Y2H2 1132 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 NME7Q9Y5B8 376 aa12.09□□□□□ -0.47
RTN1-203ENST00000395090 ANKRD62A6NC57 917 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 CASTOR2A6NHX0 329 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 TMEM189-UBE2V1I3L0A0 370 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 CYB561D2O14569 222 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 GABRDO14764 452 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 B4GALT3O60512 393 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 HUS1O60921 280 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 DDHD2O94830 711 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 FTLP02792 175 aaPredicted RBP12.08□□□□□ -0.48
RTN1-203ENST00000395090 PFKMP08237 780 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 VDRP11473 427 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 CSF2RAP15509 400 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 WARSP23381 471 aaKnown RBP12.08□□□□□ -0.48
RTN1-203ENST00000395090 GNL1P36915 607 aaPredicted RBP12.08□□□□□ -0.48
RTN1-203ENST00000395090 GALCP54803 685 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 TCEAL1Q15170 157 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 CNGA2Q16280 664 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 CLEC16AQ2KHT3 1053 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 ACAD10Q6JQN1 1059 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 ZNF280BQ86YH2 543 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 PDCL2Q8N4E4 241 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 TMEM199Q8N511 208 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 SPATA18Q8TC71 538 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 ZNF518BQ9C0D4 1074 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 LHX5Q9H2C1 402 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 CACNG4Q9UBN1 327 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 HMGXB4Q9UGU5 601 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 L1RE1Q9UN81 338 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 STXBP5LQ9Y2K9 1186 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 A0A0A6YYK5 440 aaPredicted RBP12.08□□□□□ -0.48
RTN1-203ENST00000395090 THAP12O43422 761 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 MED7O43513 233 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 EFCAB14O75071 495 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 B3GAT3O94766 335 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 LSM8O95777 96 aaKnown RBP12.08□□□□□ -0.48
RTN1-203ENST00000395090 TMEM253P0C7T8 217 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 TNNT1P13805 278 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 CDH5P33151 784 aaPredicted RBP12.08□□□□□ -0.48
RTN1-203ENST00000395090 GRIA4P48058 902 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 TIGD5Q53EQ6 642 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 LCE2CQ5TA81 110 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 PPP1R2P3Q6NXS1 205 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.08□□□□□ -0.48
RTN1-203ENST00000395090 C1orf229Q6ZS94 237 aaPredicted RBP12.08□□□□□ -0.48
RTN1-203ENST00000395090 CYFIP2Q96F07 1278 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 SENP8Q96LD8 212 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 HEXIM2Q96MH2 286 aaKnown RBP12.08□□□□□ -0.48
RTN1-203ENST00000395090 GUCA1BQ9UMX6 200 aa12.08□□□□□ -0.48
RTN1-203ENST00000395090 METTL12A8MUP2 240 aa12.07□□□□□ -0.48
RTN1-203ENST00000395090 M0QZQ0 153 aa12.07□□□□□ -0.48
RTN1-203ENST00000395090 KIF5CO60282 957 aa12.07□□□□□ -0.48
RTN1-203ENST00000395090 CYP11A1P05108 521 aa12.07□□□□□ -0.48
RTN1-203ENST00000395090 IBSPP21815 317 aaPredicted RBP12.07□□□□□ -0.48
RTN1-203ENST00000395090 LMO2P25791 158 aa12.07□□□□□ -0.48
RTN1-203ENST00000395090 NOMO3P69849 1222 aa12.07□□□□□ -0.48
RTN1-203ENST00000395090 WSCD1Q658N2 575 aa12.07□□□□□ -0.48
RTN1-203ENST00000395090 DNAAF5Q86Y56 855 aa12.07□□□□□ -0.48
RTN1-203ENST00000395090 ABI1Q8IZP0 508 aa12.07□□□□□ -0.48
RTN1-203ENST00000395090 TMEM86AQ8N2M4 240 aa12.07□□□□□ -0.48
RTN1-203ENST00000395090 WDTC1Q8N5D0 677 aa12.07□□□□□ -0.48
RTN1-203ENST00000395090 GALNT6Q8NCL4 622 aa12.07□□□□□ -0.48
RTN1-203ENST00000395090 OR6B3Q8NGW1 331 aa12.07□□□□□ -0.48
RTN1-203ENST00000395090 EDARADDQ8WWZ3 215 aa12.07□□□□□ -0.48
RTN1-203ENST00000395090 RABGGTAQ92696 567 aa12.07□□□□□ -0.48
RTN1-203ENST00000395090 TOP1MTQ969P6 601 aa12.07□□□□□ -0.48
RTN1-203ENST00000395090 ZNF775Q96BV0 537 aaPredicted RBP12.07□□□□□ -0.48
RTN1-203ENST00000395090 VCPIP1Q96JH7 1222 aa12.07□□□□□ -0.48
RTN1-203ENST00000395090 PRDM5Q9NQX1 630 aaPredicted RBP12.07□□□□□ -0.48
RTN1-203ENST00000395090 SEPT11Q9NVA2 429 aaKnown RBP12.07□□□□□ -0.48
RTN1-203ENST00000395090 PUF60Q9UHX1 559 aaKnown RBP12.07□□□□□ -0.48
RTN1-203ENST00000395090 TDRD15B5MCY1 1934 aaKnown RBP12.06□□□□□ -0.48
RTN1-203ENST00000395090 TMCO5BA8MYB1 307 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms