RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 FAM102AQ5T9C2 384 aaPredicted RBP14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 GPR142Q7Z601 462 aa14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 MTDHQ86UE4 582 aaKnown RBP14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 TRIP11Q15643 1979 aa14.09□□□□□ -0.15
GTF2F1-201ENST00000394456 KBTBD13C9JR72 458 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 UGT1A9O60656 530 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 TRUB2O95900 331 aaKnown RBP14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 TFE3P19532 575 aaPredicted RBP14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 ARL4CP56559 192 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 FAAP100Q0VG06 881 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 NR1H3Q13133 447 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 ACVR2BQ13705 512 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 ZNF667Q5HYK9 610 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 PALM2Q8IXS6 379 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 CCHCR1Q8TD31 782 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 ANKRD36BP1Q96IX9 119 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 LRRC37BQ96QE4 947 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 PTPN18Q99952 460 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 FOXP3Q9BZS1 431 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 KATNBL1Q9H079 304 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 ZNF395Q9H8N7 513 aaPredicted RBP14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 EBF2Q9HAK2 575 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 UGT1A7Q9HAW7 530 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 UGT1A10Q9HAW8 530 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 UGT1A8Q9HAW9 530 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 GBA2Q9HCG7 927 aaPredicted RBP14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 VTA1Q9NP79 307 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 USP18Q9UMW8 372 aa14.08□□□□□ -0.15
GTF2F1-201ENST00000394456 PTPN11Q06124 597 aaPredicted RBP14.08□□□□□ -0.16
GTF2F1-201ENST00000394456 DPYSL3Q14195 570 aa14.08□□□□□ -0.16
GTF2F1-201ENST00000394456 CA9Q16790 459 aa14.08□□□□□ -0.16
GTF2F1-201ENST00000394456 KBTBD12Q3ZCT8 623 aa14.08□□□□□ -0.16
GTF2F1-201ENST00000394456 TTC8Q8TAM2 541 aa14.08□□□□□ -0.16
GTF2F1-201ENST00000394456 CXorf38Q8TB03 319 aa14.08□□□□□ -0.16
GTF2F1-201ENST00000394456 CFAP36Q96G28 342 aa14.08□□□□□ -0.16
GTF2F1-201ENST00000394456 HEXIM2Q96MH2 286 aaKnown RBP14.08□□□□□ -0.16
GTF2F1-201ENST00000394456 C15orf41Q9Y2V0 281 aa14.08□□□□□ -0.16
GTF2F1-201ENST00000394456 CXorf49A8MYA2 514 aaPredicted RBP14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 UPP2O95045 317 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 CELF2O95319 508 aaKnown RBP14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 STAG3L1P0CL83 205 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 POLR2BP30876 1174 aaKnown RBP14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 CDH6P55285 790 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 DARS2Q6PI48 645 aaKnown RBP14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 CDHR3Q6ZTQ4 885 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 NLRP9Q7RTR0 991 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 GBP7Q8N8V2 638 aaPredicted RBP14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 ATP11CQ8NB49 1132 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 PPTC7Q8NI37 304 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 GTF3C2Q8WUA4 911 aaPredicted RBP14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 C16orf70Q9BSU1 422 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 ZNF518BQ9C0D4 1074 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 ACSS3Q9H6R3 686 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 CYLDQ9NQC7 956 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 FBXO6Q9NRD1 293 aaPredicted RBP14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 USH1CQ9Y6N9 552 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 A0A0G2JND7 137 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 TCRBV9S1A1TA0A576 114 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 E5RJQ4 531 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 H0Y3Z8 333 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 H3BRB1 525 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 ADCY6O43306 1168 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 TOP3BO95985 862 aaKnown RBP14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 SMPD1P17405 629 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 YY1P25490 414 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 GBP2P32456 591 aaPredicted RBP14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 GPD2P43304 727 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 PHKA2P46019 1235 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 ATXN1P54253 815 aaKnown RBP14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 YARSP54577 528 aaKnown RBP14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 ZNF484Q5JVG2 852 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 SCYL2Q6P3W7 929 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 RFWD3Q6PCD5 774 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 ADGRD1Q6QNK2 874 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 POLNQ7Z5Q5 900 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 RXFP2Q8WXD0 754 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 FAM111AQ96PZ2 611 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 ADPGKQ9BRR6 497 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 BCO2Q9BYV7 579 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 TUT1Q9H6E5 874 aaKnown RBP14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 RPF1Q9H9Y2 349 aaKnown RBP14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 PLAC1Q9HBJ0 212 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 SMG5Q9UPR3 1016 aaKnown RBP14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 HEY1Q9Y5J3 304 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 ZSWIM8A7E2V4 1837 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 CITO14578 2027 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 CEP350Q5VT06 3117 aa14.07□□□□□ -0.16
GTF2F1-201ENST00000394456 B4GALT4O60513 344 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 AP3M2P53677 418 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 YWHAGP61981 247 aaKnown RBP eCLIP14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 TAZQ16635 292 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 CES4AQ5XG92 561 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 FAM183BPQ6ZVS7 135 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 TTC7BQ86TV6 843 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 LONP2Q86WA8 852 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 BANPQ8N9N5 519 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 FAM13CQ8NE31 585 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 MAML3Q96JK9 1138 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 DHRS4Q9BTZ2 278 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms