RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 MAGEA13PA6NCF6 341 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 CAPN14A8MX76 684 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 ZNF487B1APH4 448 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 KBTBD13C9JR72 458 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 GOLGA8RI6L899 631 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 CAPN9O14815 690 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 MSCO60682 206 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 KRT38O76015 456 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 IL18RAPO95256 599 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 MYL2P10916 166 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 BGNP21810 368 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 MIPP30301 263 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 CDC25CP30307 473 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 SERPINB9P50453 376 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 YWHAGP61981 247 aaKnown RBP eCLIP10.41□□□□□ -0.74
COL17A1-203ENST00000393211 MXD4Q14582 209 aaPredicted RBP10.41□□□□□ -0.74
COL17A1-203ENST00000393211 PDK2Q15119 407 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 FAM160B1Q5W0V3 765 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 NAIF1Q69YI7 327 aaPredicted RBP10.41□□□□□ -0.74
COL17A1-203ENST00000393211 TMEM154Q6P9G4 183 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 DARS2Q6PI48 645 aaKnown RBP10.41□□□□□ -0.74
COL17A1-203ENST00000393211 POTEAQ6S8J7 498 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 CYS1Q717R9 158 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 MAP7D3Q8IWC1 876 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 SCYL3Q8IZE3 742 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 TTLL6Q8N841 843 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 PDCD7Q8N8D1 485 aaKnown RBP10.41□□□□□ -0.74
COL17A1-203ENST00000393211 MCUQ8NE86 351 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 JOSD2Q8TAC2 188 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 ZFAND2BQ8WV99 257 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 SCG3Q8WXD2 468 aaKnown RBP10.41□□□□□ -0.74
COL17A1-203ENST00000393211 TTC17Q96AE7 1141 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 ANKRD36BP1Q96IX9 119 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 FAM167AQ96KS9 214 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 TSC22D3Q99576 134 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 TEX13BQ9BXU2 312 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 STN1Q9H668 368 aaKnown RBP10.41□□□□□ -0.74
COL17A1-203ENST00000393211 GPAMQ9HCL2 828 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 SIRPGQ9P1W8 387 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 PDP2Q9P2J9 529 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 SAE1Q9UBE0 346 aaPredicted RBP10.41□□□□□ -0.74
COL17A1-203ENST00000393211 ZNF214Q9UL59 606 aaPredicted RBP10.41□□□□□ -0.74
COL17A1-203ENST00000393211 USP18Q9UMW8 372 aa10.41□□□□□ -0.74
COL17A1-203ENST00000393211 ZBTB12Q9Y330 459 aaPredicted RBP10.41□□□□□ -0.74
COL17A1-203ENST00000393211 COL11A1P12107 1806 aaPredicted RBP10.41□□□□□ -0.74
COL17A1-203ENST00000393211 C19orf81C9J6K1 198 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 TBX10O75333 385 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 CSDE1O75534 798 aaKnown RBP10.4□□□□□ -0.74
COL17A1-203ENST00000393211 CIB2O75838 187 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 KRT36O76013 467 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 TM7SF2O76062 418 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 C1QAP02745 245 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 EDN1P05305 212 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 TGM2P21980 687 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 SP100P23497 879 aaPredicted RBP10.4□□□□□ -0.74
COL17A1-203ENST00000393211 CNTFP26441 200 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 HOXD11P31277 338 aaPredicted RBP10.4□□□□□ -0.74
COL17A1-203ENST00000393211 ZNF143P52747 638 aaPredicted RBP10.4□□□□□ -0.74
COL17A1-203ENST00000393211 SMTNL2Q2TAL5 461 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 SLC30A9Q6PML9 568 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 KYAT3Q6YP21 454 aaKnown RBP10.4□□□□□ -0.74
COL17A1-203ENST00000393211 ARCQ7LC44 396 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 ADGRG6Q86SQ4 1221 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 IGDCC3Q8IVU1 814 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 MFN1Q8IWA4 741 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 ZBTB8OSQ8IWT0 167 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 NIM1KQ8IY84 436 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 KIAA0319LQ8IZA0 1049 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 TTC39CQ8N584 583 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 E2F7Q96AV8 911 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 FAF2Q96CS3 445 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 KLF6Q99612 283 aaPredicted RBP10.4□□□□□ -0.74
COL17A1-203ENST00000393211 SYT15Q9BQS2 421 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 CNPY3Q9BT09 278 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 TCHPQ9BT92 498 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 YIPF3Q9GZM5 350 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 FAM192AQ9GZU8 254 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 FAM96AQ9H5X1 160 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 CYP3A43Q9HB55 503 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 MYOZ2Q9NPC6 264 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 METTL5Q9NRN9 209 aaKnown RBP10.4□□□□□ -0.74
COL17A1-203ENST00000393211 TAGLN3Q9UI15 199 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 TTLL3Q9Y4R7 772 aa10.4□□□□□ -0.74
COL17A1-203ENST00000393211 BCLAF3A2AJT9 711 aaKnown RBP10.4□□□□□ -0.75
COL17A1-203ENST00000393211 B2RBV5 119 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 TRIM49D1C9J1S8 452 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 SPECC1L-ADORA2AF8WAN1 911 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 SMIM24O75264 130 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 FKBP6O75344 327 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 HMGCRP04035 888 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 PDHA1P08559 390 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 HOXC6P09630 235 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 CD19P15391 556 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 PROZP22891 400 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 ATICP31939 592 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 CRHR1P34998 444 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 TNFSF9P41273 254 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 YWHAZP63104 245 aaKnown RBP10.4□□□□□ -0.75
COL17A1-203ENST00000393211 SP4Q02446 784 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 WASHC5Q12768 1159 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms