RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 STRA8Q7Z7C7 330 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 NT5DC3Q86UY8 548 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 MCOLN2Q8IZK6 566 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 UBE2OQ9C0C9 1292 aaKnown RBP13.56□□□□□ -0.24
LCA5-202ENST00000392959 KLHL4Q9C0H6 718 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 RHBDL2Q9NX52 303 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 NCKIPSDQ9NZQ3 722 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 RRN3P2A6NIE6 340 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 SERPIND1P05546 499 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 RARAP10276 462 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 MPP3Q13368 585 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 ARHGEF7Q14155 803 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 GLRA4Q5JXX5 417 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 MPZL3Q6UWV2 235 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 ADCK2Q7Z695 626 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 ADGRA1Q86SQ6 560 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 C4orf19Q8IY42 314 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 CCDC33Q8N5R6 958 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 RXFP2Q8WXD0 754 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 APBB2Q92870 758 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 GMCL1Q96IK5 515 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 SEPT5Q99719 369 aaPredicted RBP13.56□□□□□ -0.24
LCA5-202ENST00000392959 DEFB129Q9H1M3 183 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 PIDD1Q9HB75 910 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 TRPC7Q9HCX4 862 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 GDF3Q9NR23 364 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 TRMT6Q9UJA5 497 aaKnown RBP13.56□□□□□ -0.24
LCA5-202ENST00000392959 DNALI1O14645 258 aaPredicted RBP13.55□□□□□ -0.24
LCA5-202ENST00000392959 STRNO43815 780 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 MYL6P60660 151 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 SNX17Q15036 470 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 AMHR2Q16671 573 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 MGAT5BQ3V5L5 792 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 PRAMEF18Q5VWM3 479 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 SLFN11Q7Z7L1 901 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 FAM131BQ86XD5 332 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 BLOC1S5Q8TDH9 187 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 SLITRK1Q96PX8 696 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 SCAF8Q9UPN6 1271 aaKnown RBP13.55□□□□□ -0.24
LCA5-202ENST00000392959 PTPN11Q06124 597 aaPredicted RBP13.55□□□□□ -0.24
LCA5-202ENST00000392959 SNX30Q5VWJ9 437 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 TRIM69Q86WT6 500 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 CD302Q8IX05 232 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 TSEN2Q8NCE0 465 aaKnown RBP13.55□□□□□ -0.24
LCA5-202ENST00000392959 SEPT8Q92599 483 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 ZNF333Q96JL9 665 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 APOL2Q9BQE5 337 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 IARS2Q9NSE4 1012 aaKnown RBP13.55□□□□□ -0.24
LCA5-202ENST00000392959 AP4E1Q9UPM8 1137 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 CNTNAP4Q9C0A0 1308 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 HEATR9A2RTY3 570 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 ATP9AO75110 1047 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 ALDH1A1P00352 501 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 SUPT20HL2P0C7V6 817 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 PPP3CCP48454 512 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 MGAT5Q09328 741 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 OASLQ15646 514 aaKnown RBP13.55□□□□□ -0.24
LCA5-202ENST00000392959 FUT11Q495W5 492 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 TCP10LQ8TDR4 215 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 TATDN2Q93075 761 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 TMEM245Q9H330 911 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 CYP4F12Q9HCS2 524 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 IMPAD1Q9NX62 359 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 TSC22D4Q9Y3Q8 395 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 FCHO1O14526 889 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 AP1G2O75843 785 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 SLC2A3P11169 496 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 CAP2P40123 477 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 ELK3P41970 407 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 CSTF3Q12996 717 aaKnown RBP13.55□□□□□ -0.24
LCA5-202ENST00000392959 FOXR1Q6PIV2 292 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 ZBTB49Q6ZSB9 765 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 DEFB107AQ8IZN7 70 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 TBC1D19Q8N5T2 526 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 RTFDC1Q9BY42 306 aaPredicted RBP13.55□□□□□ -0.24
LCA5-202ENST00000392959 PAPOLBQ9NRJ5 636 aaKnown RBP13.55□□□□□ -0.24
LCA5-202ENST00000392959 KCND1Q9NSA2 647 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 LMTK2Q8IWU2 1503 aa13.55□□□□□ -0.24
LCA5-202ENST00000392959 TCRBV5S4A2TA0A5A2 114 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 OCM2P0CE71 109 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 OCMP0CE72 109 aaPredicted RBP13.54□□□□□ -0.24
LCA5-202ENST00000392959 PLIN5Q00G26 463 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 MAPRE1Q15691 268 aaKnown RBP13.54□□□□□ -0.24
LCA5-202ENST00000392959 LRCH1Q9Y2L9 728 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 PCDHA3Q9Y5H8 950 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 SALL1Q9NSC2 1324 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 VWA5AO00534 786 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 PECAM1P16284 738 aaPredicted RBP13.54□□□□□ -0.24
LCA5-202ENST00000392959 CLCN3P51790 818 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 CACNA2D1P54289 1103 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 TTLL9Q3SXZ7 439 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 C10orf120Q5SQS8 335 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 PDPK2PQ6A1A2 396 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 PHF21AQ96BD5 680 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 HES6Q96HZ4 224 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 GGA3Q9NZ52 723 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 WWOXQ9NZC7 414 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 CRLS1Q9UJA2 301 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 EIF3LQ9Y262 564 aaKnown RBP13.54□□□□□ -0.24
LCA5-202ENST00000392959 BCAT1P54687 386 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms