RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 KLK7P49862 253 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 MRE11P49959 708 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 TUBP50607 506 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 JAM2P57087 298 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 TAF10Q12962 218 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 TEAD2Q15562 447 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 SLC5A9Q2M3M2 681 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 GPR158Q5T848 1215 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 PM20D1Q6GTS8 502 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 SARM1Q6SZW1 724 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 CCDC186Q7Z3E2 898 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 TMEM150AQ86TG1 271 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 PIGZQ86VD9 579 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 SCML4Q8N228 414 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 ARHGAP18Q8N392 663 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 RNF214Q8ND24 703 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 SCAMP5Q8TAC9 235 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 FEZF2Q8TBJ5 459 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 ADAMTS19Q8TE59 1207 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 SMARCD2Q92925 531 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 FBXO32Q969P5 355 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 TCEAL4Q96EI5 215 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 MCRS1Q96EZ8 462 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 NOX5Q96PH1 765 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 CDK5RAP1Q96SZ6 601 aaKnown RBP7.13□□□□□ -1.27
UBBP1-201ENST00000392399 ZSWIM1Q9BR11 485 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 SLITRK6Q9H5Y7 841 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 TRPV4Q9HBA0 871 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 LRRC4Q9HBW1 653 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 NLRC4Q9NPP4 1024 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 CNGB3Q9NQW8 809 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 TLR8Q9NR97 1041 aaKnown RBP7.13□□□□□ -1.27
UBBP1-201ENST00000392399 OBP2AQ9NY56 170 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 IFNKQ9P0W0 207 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 AJAP1Q9UKB5 411 aaPredicted RBP7.13□□□□□ -1.27
UBBP1-201ENST00000392399 CEP83Q9Y592 693 aa7.13□□□□□ -1.27
UBBP1-201ENST00000392399 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.13□□□□□ -1.27
UBBP1-201ENST00000392399 MUC3AQ02505 3323 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 PTPRDP23468 1912 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 TRAV19A0A0A6YYK7 116 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 ZNF840PA6NDX5 716 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 ANHXE9PGG2 379 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 EPHB6O15197 1021 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 SART1O43290 800 aaKnown RBP7.12□□□□□ -1.27
UBBP1-201ENST00000392399 ECI2O75521 394 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 FBXO21O94952 628 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 LSM8O95777 96 aaKnown RBP7.12□□□□□ -1.27
UBBP1-201ENST00000392399 ZBED1O96006 694 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 USP17L7P0C7H9 530 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 FERP16591 822 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 HDCP19113 662 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 SSTR3P32745 418 aaPredicted RBP7.12□□□□□ -1.27
UBBP1-201ENST00000392399 AVPR1AP37288 418 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 TKTL1P51854 596 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 USP46P62068 366 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 TRIM14Q14142 442 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 ZNF268Q14587 947 aaPredicted RBP7.12□□□□□ -1.27
UBBP1-201ENST00000392399 SPECC1LQ69YQ0 1117 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 PPP1R2P3Q6NXS1 205 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 KLHDC10Q6PID8 442 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 TRIM72Q6ZMU5 477 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 TADA2BQ86TJ2 420 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 TMEM110Q86TL2 294 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 SLC47A2Q86VL8 602 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 RNF135Q8IUD6 432 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 CMTM8Q8IZV2 173 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 SIX6OS1Q8N1H7 587 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 KIAA1958Q8N8K9 716 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 TMEM35BQ8NCS4 154 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 UBA3Q8TBC4 463 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 ZSCAN18Q8TBC5 510 aaPredicted RBP7.12□□□□□ -1.27
UBBP1-201ENST00000392399 IRGQQ8WZA9 623 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 DDX1Q92499 740 aaKnown RBP7.12□□□□□ -1.27
UBBP1-201ENST00000392399 SYN2Q92777 582 aaPredicted RBP7.12□□□□□ -1.27
UBBP1-201ENST00000392399 KHSRPQ92945 711 aaKnown RBP eCLIP7.12□□□□□ -1.27
UBBP1-201ENST00000392399 SECISBP2LQ93073 1101 aaKnown RBP7.12□□□□□ -1.27
UBBP1-201ENST00000392399 ELSPBP1Q96BH3 223 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 ASB16Q96NS5 453 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 TRIM62Q9BVG3 475 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 SLC46A2Q9BY10 475 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 XPO4Q9C0E2 1151 aaKnown RBP7.12□□□□□ -1.27
UBBP1-201ENST00000392399 TTYH3Q9C0H2 523 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 MIS12Q9H081 205 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 PDCL3Q9H2J4 239 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 KIF9Q9HAQ2 790 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 KCNK12Q9HB15 430 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 ZFP14Q9HCL3 533 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 CLIC5Q9NZA1 410 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 AIPL1Q9NZN9 384 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 LIMD1Q9UGP4 676 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 CHORDC1Q9UHD1 332 aaPredicted RBP7.12□□□□□ -1.27
UBBP1-201ENST00000392399 BZW2Q9Y6E2 419 aaKnown RBP7.12□□□□□ -1.27
UBBP1-201ENST00000392399 CUL9Q8IWT3 2517 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 TRIOO75962 3097 aa7.12□□□□□ -1.27
UBBP1-201ENST00000392399 DOCK6Q96HP0 2047 aa7.11□□□□□ -1.27
UBBP1-201ENST00000392399 NOTCH4Q99466 2003 aa7.11□□□□□ -1.27
UBBP1-201ENST00000392399 C2orf16Q68DN1 1984 aa7.11□□□□□ -1.27
UBBP1-201ENST00000392399 TULP2O00295 520 aa7.11□□□□□ -1.27
UBBP1-201ENST00000392399 DPYSL4O14531 572 aa7.11□□□□□ -1.27
UBBP1-201ENST00000392399 TADA3O75528 432 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms