RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 CDYLQ9Y232 598 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 PCDHA2Q9Y5H9 948 aa13.62□□□□□ -0.23
TRAPPC9-201ENST00000389328 THRAP10827 490 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 MAP4P27816 1152 aaKnown RBP13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 GLRBP48167 497 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 ACVR2BQ13705 512 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 DPYSL3Q14195 570 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 ULK2Q8IYT8 1036 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 ZNF786Q8N393 782 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 ZNF483Q8TF39 744 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 VCPIP1Q96JH7 1222 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 NDNQ99608 321 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 TFE3P19532 575 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 IL10P22301 178 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 IL31Q6EBC2 164 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 OR6Y1Q8NGX8 325 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 KIF12Q96FN5 646 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 BAG5Q9UL15 447 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 ZMYND8Q9ULU4 1186 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 WASF2Q9Y6W5 498 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 STRNO43815 780 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 PEX11AO75192 247 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 CYP3A4P08684 503 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 VIL1P09327 827 aaKnown RBP13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 MAPTP10636 758 aaKnown RBP13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 YWHAHQ04917 246 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 BOLA3Q53S33 107 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 APOBEC3HQ6NTF7 200 aaKnown RBP13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 ACSS3Q9H6R3 686 aa13.61□□□□□ -0.23
TRAPPC9-201ENST00000389328 GSTA4O15217 222 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 ICAM1P05362 532 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 CPA3P15088 417 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 ZBTB17Q13105 803 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 ARMC3Q5W041 872 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 FAM228AQ86W67 206 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 STKLD1Q8NE28 680 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 LRRN4Q8WUT4 740 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 ZDHHC15Q96MV8 337 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 MROH7Q68CQ1 1323 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 PRR5-ARHGAP8B1AHC4 643 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 AVILO75366 819 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 ASMTLO95671 621 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 C6orf222P0C671 652 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 ARHGAP8P85298 464 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 PPIDQ08752 370 aaKnown RBP13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 EFHC2Q5JST6 749 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 EMC10Q5UCC4 262 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 MAP4K3Q8IVH8 894 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 NUP93Q8N1F7 819 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 RXFP2Q8WXD0 754 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 CGRRF1Q99675 332 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 FSD1LQ9BXM9 530 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 CEP41Q9BYV8 373 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 C2orf40Q9H1Z8 148 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 RPL26L1Q9UNX3 145 aaKnown RBP13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 ARHGEF37A1IGU5 675 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 PEX1O43933 1283 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 PDGFRBP09619 1106 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 PMLP29590 882 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 HMGCS2P54868 508 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 MRPS22P82650 360 aaKnown RBP13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 NPNTQ6UXI9 565 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 NET1Q7Z628 596 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 DDIASQ8IXT1 998 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 EXOC8Q8IYI6 725 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 RBM15BQ8NDT2 890 aaKnown RBP13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 RNF217Q8TC41 542 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 FAM167AQ96KS9 214 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 FRMD8P1Q9BZ68 369 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 ACAD9Q9H845 621 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 DCDC2Q9UHG0 476 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 CSADQ9Y600 493 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 A0A0B4J269 797 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 ITGB3P05106 788 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 Q3C1V9 767 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 ARL13BQ3SXY8 428 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 PPP1R15BQ5SWA1 713 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 ANO7Q6IWH7 933 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 TTC33Q6PID6 262 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 OR6P1Q8NGX9 317 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 USP33Q8TEY7 942 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 DDI1Q8WTU0 396 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 PHACTR1Q9C0D0 580 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 ADNPQ9H2P0 1102 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 MMADHCQ9H3L0 296 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 DMAP1Q9NPF5 467 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 STX18Q9P2W9 335 aaKnown RBP13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 SUN2Q9UH99 717 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 V9GYQ6 96 aa13.6□□□□□ -0.23
TRAPPC9-201ENST00000389328 WDR46O15213 610 aaKnown RBP13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 PRPF4O43172 522 aaKnown RBP eCLIP13.59□□□□□ -0.233e-6■■■■□ 20.5
TRAPPC9-201ENST00000389328 PKNOX1P55347 436 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 PDAP1Q13442 181 aaKnown RBP13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 MAPRE2Q15555 327 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 ACSBG2Q5FVE4 666 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 LPCAT4Q643R3 524 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 CES3Q6UWW8 571 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 RINLQ6ZS11 566 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 ARMCX2Q7L311 632 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 TTC7BQ86TV6 843 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms