RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 LRIG1Q96JA1 1093 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 HIC2Q96JB3 615 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 THAP7Q9BT49 309 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 PCIF1Q9H4Z3 704 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 ASIC5Q9NY37 505 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 MAFFQ9ULX9 164 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 COQ6Q9Y2Z9 468 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 HIVEP1P15822 2718 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 ST20-MTHFSA0A0A6YYL1 179 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 A0A1B0GVT2 93 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 TCRBV7S2A1N4TA0A589 114 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 PATL2C9JE40 543 aaKnown RBP-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 M0R2C6 588 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 SLC16A3O15427 465 aaKnown RBP-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 TLR5O60602 858 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 ATG13O75143 517 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 FGFR1P11362 822 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 PTX3P26022 381 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 CCR10P46092 362 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 PIGFQ07326 219 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 TRAF2Q12933 501 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 KRTAP6-3Q3LI67 103 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 RNF212Q495C1 297 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 PLEKHO1Q53GL0 409 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 SLC25A30Q5SVS4 291 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 TTLL5Q6EMB2 1281 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 TMEM65Q6PI78 240 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 METTL7BQ6UX53 244 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 SEM1Q6ZVN7 128 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 FAM57BQ71RH2 274 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 SLC26A9Q7LBE3 791 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 KRT26Q7Z3Y9 468 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 FAM178BQ8IXR5 827 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 NAGSQ8N159 534 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 CFAP52Q8N1V2 620 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 KIR2DL5BQ8NHK3 375 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 OSBP2Q969R2 916 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 LINC00479Q96M42 142 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 LENG8Q96PV6 779 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 BOCQ9BWV1 1114 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 BRINP2Q9C0B6 783 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 ANAPC11Q9NYG5 84 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 SERPINA10Q9UK55 444 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 PCDHA9Q9Y5H5 950 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 CSAG2Q9Y5P2 127 aa-0.14□□□□□ -2.43
RNU6-540P-201ENST00000384622 PCLOQ9Y6V0 5065 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 TENM4Q6N022 2769 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 E9PQ18 207 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 DVL2O14641 736 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 KIAA0391O15091 583 aaKnown RBP-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 FGF17O60258 216 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 PHF2O75151 1096 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 MT-CO3P00414 261 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 DAOP14920 347 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 ZNF12P17014 697 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 FPR3P25089 353 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 TLX1P31314 330 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 TPTEP56180 551 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 TLE4Q04727 773 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 GRSF1Q12849 480 aaKnown RBP eCLIP-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 NFATC2Q13469 925 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 HDAC1Q13547 482 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 KRTAP6-1Q3LI64 71 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 RNASE12Q5GAN4 147 aaKnown RBP-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 FAAP20Q6NZ36 180 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 OVCH1Q7RTY7 1134 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 MARCH9Q86YJ5 346 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 CLIP4Q8N3C7 705 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 BMPERQ8N8U9 685 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 OR7D4Q8NG98 312 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 TMED6Q8WW62 240 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 XAGE5Q8WWM1 108 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 IL17FQ96PD4 163 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 F2RL3Q96RI0 385 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 TRIB1Q96RU8 372 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 RBM4BQ9BQ04 359 aaKnown RBP-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 SCRT1Q9BWW7 348 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 PLEKHA4Q9H4M7 779 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 TCF7L1Q9HCS4 588 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 RUSC2Q8N2Y8 1516 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 SONP18583 2426 aaKnown RBP-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 RPTORQ8N122 1335 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 ATRXP46100 2492 aa-0.15□□□□□ -2.43
RNU6-540P-201ENST00000384622 C2CD4BA6NLJ0 364 aa-0.16□□□□□ -2.44
RNU6-540P-201ENST00000384622 PRAC2D3DTV9 90 aa-0.16□□□□□ -2.44
RNU6-540P-201ENST00000384622 WDR47O94967 919 aa-0.16□□□□□ -2.44
RNU6-540P-201ENST00000384622 TJP3O95049 919 aa-0.16□□□□□ -2.44
RNU6-540P-201ENST00000384622 AGFG2O95081 481 aa-0.16□□□□□ -2.44
RNU6-540P-201ENST00000384622 PFKMP08237 780 aa-0.16□□□□□ -2.44
RNU6-540P-201ENST00000384622 DLDP09622 509 aaKnown RBP-0.16□□□□□ -2.44
RNU6-540P-201ENST00000384622 KRT13P13646 458 aa-0.16□□□□□ -2.44
RNU6-540P-201ENST00000384622 RXRAP19793 462 aa-0.16□□□□□ -2.44
RNU6-540P-201ENST00000384622 NR1D1P20393 614 aa-0.16□□□□□ -2.44
RNU6-540P-201ENST00000384622 TACR3P29371 465 aa-0.16□□□□□ -2.44
RNU6-540P-201ENST00000384622 CD6P30203 668 aa-0.16□□□□□ -2.44
RNU6-540P-201ENST00000384622 ADSLP30566 484 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-540P-201ENST00000384622 TIMP3P35625 211 aa-0.16□□□□□ -2.44
RNU6-540P-201ENST00000384622 TUBA1BP68363 451 aa-0.16□□□□□ -2.44
RNU6-540P-201ENST00000384622 ABATP80404 500 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms