RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 C1orf127Q8N9H9 656 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 DBF4BQ8NFT6 615 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 BEST2Q8NFU1 509 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 ZNF564Q8TBZ8 553 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-202ENST00000379996 PHOSPHO2Q8TCD6 241 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 HERVK_113Q902F9 699 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 ZMAT2Q96NC0 199 aaKnown RBP8.13□□□□□ -1.11
CDKL5-202ENST00000379996 MRPL9Q9BYD2 267 aaKnown RBP8.13□□□□□ -1.11
CDKL5-202ENST00000379996 BCO2Q9BYV7 579 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 CHORDC1Q9UHD1 332 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-202ENST00000379996 SIX4Q9UIU6 781 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 GINS2Q9Y248 185 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 ATP8A1Q9Y2Q0 1164 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 ARL5CA6NH57 179 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 E7EVH7 732 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 TBXAS1P24557 533 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-202ENST00000379996 HPDP32754 393 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-202ENST00000379996 IFI35P80217 286 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-202ENST00000379996 CENPCQ03188 943 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 XRCC4Q13426 336 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 SLC29A2Q14542 456 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 CCDC137Q6PK04 289 aaKnown RBP8.13□□□□□ -1.11
CDKL5-202ENST00000379996 VSTM1Q6UX27 236 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 OR5B17Q8NGF7 314 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 MDM1Q8TC05 714 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 KCTD12Q96CX2 325 aaKnown RBP8.13□□□□□ -1.11
CDKL5-202ENST00000379996 NUP85Q9BW27 656 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 CYLDQ9NQC7 956 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.13□□□□□ -1.11
CDKL5-202ENST00000379996 WHRNQ9P202 907 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 SNX24Q9Y343 169 aa8.13□□□□□ -1.11
CDKL5-202ENST00000379996 DNAJC8O75937 253 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-202ENST00000379996 AGTP01019 485 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 MPSTP25325 297 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 RBP5P82980 135 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 FPGSQ05932 587 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 NFX1Q12986 1120 aaKnown RBP8.12□□□□□ -1.11
CDKL5-202ENST00000379996 OCLNQ16625 522 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 TAS1R2Q8TE23 839 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 CASD1Q96PB1 797 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 POP1Q99575 1024 aaKnown RBP8.12□□□□□ -1.11
CDKL5-202ENST00000379996 CYP3A43Q9HB55 503 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 DPP3Q9NY33 737 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 FCF1Q9Y324 198 aaKnown RBP8.12□□□□□ -1.11
CDKL5-202ENST00000379996 CHN1P15882 459 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 RGS19P49795 217 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 ZNF132P52740 706 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 GSCP56915 257 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-202ENST00000379996 CNGA2Q16280 664 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 CLLU1OSQ5K130 101 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 COL13A1Q5TAT6 717 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-202ENST00000379996 DPH6Q7L8W6 267 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 TAX1BP1Q86VP1 789 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 EPS8L3Q8TE67 593 aaKnown RBP8.12□□□□□ -1.11
CDKL5-202ENST00000379996 TOP1MTQ969P6 601 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 RUNDC3BQ96NL0 473 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 TRIM7Q9C029 511 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 STK39Q9UEW8 545 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 DGKIO75912 1065 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 HLA-DRAP01903 254 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 AMHP03971 560 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 TMEM191BP0C7N4 346 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 RAG1P15918 1043 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 TNNI1P19237 187 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 KLRC2P26717 231 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 GCAP28676 217 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 CHKAP35790 457 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 HTRA4P83105 476 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-202ENST00000379996 ITIH4Q14624 930 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 GALNTL6Q49A17 601 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 C9orf57Q5W0N0 161 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 CGB2Q6NT52 195 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 ADAT2Q7Z6V5 191 aaKnown RBP8.12□□□□□ -1.11
CDKL5-202ENST00000379996 EXOC3L1Q86VI1 746 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 CMTR2Q8IYT2 770 aaKnown RBP8.12□□□□□ -1.11
CDKL5-202ENST00000379996 UBL4BQ8N7F7 174 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 WNT2BQ93097 391 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 CHMP6Q96FZ7 201 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 SCLYQ96I15 445 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 ZNF560Q96MR9 790 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 MTMR12Q9C0I1 747 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 LGALS13Q9UHV8 139 aa8.12□□□□□ -1.11
CDKL5-202ENST00000379996 PATJQ8NI35 1801 aa8.11□□□□□ -1.11
CDKL5-202ENST00000379996 COL4A4P53420 1690 aaPredicted RBP8.11□□□□□ -1.11
CDKL5-202ENST00000379996 GOLGA6L10A0A0M3HER8 536 aa8.11□□□□□ -1.11
CDKL5-202ENST00000379996 VGLL3A8MV65 326 aa8.11□□□□□ -1.11
CDKL5-202ENST00000379996 O00370 1275 aa8.11□□□□□ -1.11
CDKL5-202ENST00000379996 THP07101 528 aa8.11□□□□□ -1.11
CDKL5-202ENST00000379996 JUNDP17535 347 aa8.11□□□□□ -1.11
CDKL5-202ENST00000379996 INCA1Q0VD86 236 aa8.11□□□□□ -1.11
CDKL5-202ENST00000379996 TUSC3Q13454 348 aa8.11□□□□□ -1.11
CDKL5-202ENST00000379996 UPP1Q16831 310 aa8.11□□□□□ -1.11
CDKL5-202ENST00000379996 SCARA3Q6AZY7 606 aa8.11□□□□□ -1.11
CDKL5-202ENST00000379996 CDR2LQ86X02 465 aaPredicted RBP8.11□□□□□ -1.11
CDKL5-202ENST00000379996 GPR65Q8IYL9 337 aa8.11□□□□□ -1.11
CDKL5-202ENST00000379996 MCOLN2Q8IZK6 566 aa8.11□□□□□ -1.11
CDKL5-202ENST00000379996 URGCPQ8TCY9 931 aa8.11□□□□□ -1.11
CDKL5-202ENST00000379996 MAGEC3Q8TD91 643 aa8.11□□□□□ -1.11
CDKL5-202ENST00000379996 P3H4Q92791 437 aa8.11□□□□□ -1.11
CDKL5-202ENST00000379996 CCDC127Q96BQ5 260 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms