RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 UGT1A10Q9HAW8 530 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 UGT1A8Q9HAW9 530 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 PPARGC1AQ9UBK2 798 aaKnown RBP13.48□□□□□ -0.25
USP11-204ENST00000377107 MCM8Q9UJA3 840 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 CCDC78A2IDD5 438 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 HAUS5O94927 633 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 F7P08709 466 aaPredicted RBP13.48□□□□□ -0.25
USP11-204ENST00000377107 ZNF132P52740 706 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 SESN2P58004 480 aaPredicted RBP13.48□□□□□ -0.25
USP11-204ENST00000377107 KDSRQ06136 332 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 TARBP2Q15633 366 aaKnown RBP13.48□□□□□ -0.25
USP11-204ENST00000377107 MAP7D3Q8IWC1 876 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 NME8Q8N427 588 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 ACAP3Q96P50 834 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 SHCBP1LQ9BZQ2 653 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 FOXP3Q9BZS1 431 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 IL1RAPL1Q9NZN1 696 aa13.48□□□□□ -0.25
USP11-204ENST00000377107 CYB561D2O14569 222 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 GYG2O15488 501 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 TRUB2O95900 331 aaKnown RBP13.47□□□□□ -0.25
USP11-204ENST00000377107 TOP3BO95985 862 aaKnown RBP13.47□□□□□ -0.25
USP11-204ENST00000377107 OAS1P00973 400 aaKnown RBP13.47□□□□□ -0.25
USP11-204ENST00000377107 PIGRP01833 764 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
USP11-204ENST00000377107 ABHD2P08910 425 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 LRRC38Q5VT99 294 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 CCDC62Q6P9F0 684 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 TTC7BQ86TV6 843 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 NDRG1Q92597 394 aaKnown RBP13.47□□□□□ -0.25
USP11-204ENST00000377107 SERAC1Q96JX3 654 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 SENP1Q9P0U3 644 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 FAM237BA0A1B0GVD1 139 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 I3L4J1 428 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 NEBLO76041 1014 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 ATG7O95352 703 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 ITGBL1O95965 494 aaPredicted RBP13.47□□□□□ -0.25
USP11-204ENST00000377107 ESRRAP11474 423 aaPredicted RBP13.47□□□□□ -0.25
USP11-204ENST00000377107 DESP17661 470 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 CA9Q16790 459 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 AFG1LQ8WV93 481 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 PRR11Q96HE9 360 aaPredicted RBP13.47□□□□□ -0.25
USP11-204ENST00000377107 PPP1R12CQ9BZL4 782 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 SMARCAD1Q9H4L7 1026 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 RSAD1Q9HA92 442 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 SLC24A3Q9HC58 644 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 NKX1-2Q9UD57 310 aaPredicted RBP13.47□□□□□ -0.25
USP11-204ENST00000377107 C15orf41Q9Y2V0 281 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 A6NJR5 290 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 APOC4-APOC2K7ER74 178 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 APOC2P02655 101 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 ENO1P06733 434 aaKnown RBP13.47□□□□□ -0.25
USP11-204ENST00000377107 CELF3Q5SZQ8 465 aaKnown RBP13.47□□□□□ -0.25
USP11-204ENST00000377107 KIAA1217Q5T5P2 1943 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 RNF43Q68DV7 783 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 ARID3BQ8IVW6 561 aaPredicted RBP13.47□□□□□ -0.25
USP11-204ENST00000377107 DPP3Q9NY33 737 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 SLC24A2Q9UI40 661 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 STARD13Q9Y3M8 1113 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 SNCAIPQ9Y6H5 919 aa13.47□□□□□ -0.25
USP11-204ENST00000377107 TCEA3O75764 348 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 MYL2P10916 166 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 SAT1P21673 171 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 RASSF2P50749 326 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 TFDP2Q14188 446 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 ZNF268Q14587 947 aaPredicted RBP13.46□□□□□ -0.25
USP11-204ENST00000377107 CES3Q6UWW8 571 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 ANKLE1Q8NAG6 615 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 AGR3Q8TD06 166 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 GPRC5DQ9NZD1 345 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 SLC17A6Q9P2U8 582 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 TTLL3Q9Y4R7 772 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 A8MXQ7 604 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 APOL1O14791 398 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 ARF4P18085 180 aaPredicted RBP13.46□□□□□ -0.25
USP11-204ENST00000377107 TFE3P19532 575 aaPredicted RBP13.46□□□□□ -0.25
USP11-204ENST00000377107 CCND1P24385 295 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 GRIA1P42261 906 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 GALNTL6Q49A17 601 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 PLEKHG4Q58EX7 1191 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 RIOX2Q8IUF8 465 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 NAT8LQ8N9F0 302 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 NLGN2Q8NFZ4 835 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 AGAP3Q96P47 875 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 NT5C1AQ9BXI3 368 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 TMEM120AQ9BXJ8 343 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 PRKAG3Q9UGI9 489 aa13.46□□□□□ -0.25
USP11-204ENST00000377107 PPEF2O14830 753 aa13.46□□□□□ -0.26
USP11-204ENST00000377107 CREB3O43889 395 aa13.46□□□□□ -0.26
USP11-204ENST00000377107 ZWINTO95229 277 aa13.46□□□□□ -0.26
USP11-204ENST00000377107 ICAM3P32942 547 aa13.46□□□□□ -0.26
USP11-204ENST00000377107 ALDH18A1P54886 795 aaKnown RBP13.46□□□□□ -0.26
USP11-204ENST00000377107 TTLL4Q14679 1199 aa13.46□□□□□ -0.26
USP11-204ENST00000377107 PPP1R26Q5T8A7 1209 aaPredicted RBP13.46□□□□□ -0.26
USP11-204ENST00000377107 UNC5BQ8IZJ1 945 aa13.46□□□□□ -0.26
USP11-204ENST00000377107 PDCD7Q8N8D1 485 aaKnown RBP13.46□□□□□ -0.26
USP11-204ENST00000377107 CLEC4CQ8WTT0 213 aa13.46□□□□□ -0.26
USP11-204ENST00000377107 CXCL16Q9H2A7 254 aa13.46□□□□□ -0.26
USP11-204ENST00000377107 ACSS3Q9H6R3 686 aa13.46□□□□□ -0.26
USP11-204ENST00000377107 ARHGEF3Q9NR81 526 aa13.46□□□□□ -0.26
USP11-204ENST00000377107 ZMYND8Q9ULU4 1186 aaPredicted RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms