RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 VTA1Q9NP79 307 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 HESX1Q9UBX0 185 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 SMG5Q9UPR3 1016 aaKnown RBP10.03□□□□□ -0.8
TRIM39-202ENST00000376659 DOCK3Q8IZD9 2030 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 EXOC1LA0A1B0GW35 172 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 BCLAF3A2AJT9 711 aaKnown RBP10.03□□□□□ -0.8
TRIM39-202ENST00000376659 RASA4BC9J798 803 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 CHADO15335 359 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 RASA4O43374 803 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 VTNP04004 478 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 KRT16P08779 473 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 YBX3P16989 372 aaKnown RBP eCLIP10.03□□□□□ -0.8
TRIM39-202ENST00000376659 PRKCHP24723 683 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 SSTR1P30872 391 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 IREB2P48200 963 aaKnown RBP10.03□□□□□ -0.8
TRIM39-202ENST00000376659 GRB14Q14449 540 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 HIF1AQ16665 826 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 ZNF667Q5HYK9 610 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 PPP1R26Q5T8A7 1209 aaPredicted RBP10.03□□□□□ -0.8
TRIM39-202ENST00000376659 C12orf29Q8N999 325 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 DPF3Q92784 378 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 SERAC1Q96JX3 654 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 RNF157Q96PX1 679 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 TRABDQ9H4I3 376 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 PCDH18Q9HCL0 1135 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 SLCO1B3Q9NPD5 702 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 ARHGEF4Q9NR80 690 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 TSPAN16Q9UKR8 245 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 ZNF148Q9UQR1 794 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 CSADQ9Y600 493 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 PAPSS1O43252 624 aaPredicted RBP10.02□□□□□ -0.8
TRIM39-202ENST00000376659 MMP3P08254 477 aa10.02□□□□□ -0.8
TRIM39-202ENST00000376659 NQO1P15559 274 aaKnown RBP10.02□□□□□ -0.8
TRIM39-202ENST00000376659 PHKA2P46019 1235 aa10.02□□□□□ -0.8
TRIM39-202ENST00000376659 PDIA2Q13087 525 aaKnown RBP10.02□□□□□ -0.8
TRIM39-202ENST00000376659 ARHGAP17Q68EM7 881 aa10.02□□□□□ -0.8
TRIM39-202ENST00000376659 CYP4F22Q6NT55 531 aa10.02□□□□□ -0.8
TRIM39-202ENST00000376659 PPP1R21Q6ZMI0 780 aa10.02□□□□□ -0.8
TRIM39-202ENST00000376659 ARHGEF18Q6ZSZ5 1173 aa10.02□□□□□ -0.8
TRIM39-202ENST00000376659 FBXO36Q8NEA4 188 aa10.02□□□□□ -0.8
TRIM39-202ENST00000376659 SLC44A1Q8WWI5 657 aa10.02□□□□□ -0.8
TRIM39-202ENST00000376659 NT5C3BQ969T7 300 aa10.02□□□□□ -0.8
TRIM39-202ENST00000376659 HPDLQ96IR7 371 aa10.02□□□□□ -0.8
TRIM39-202ENST00000376659 CNPY3Q9BT09 278 aa10.02□□□□□ -0.8
TRIM39-202ENST00000376659 CDHR5Q9HBB8 845 aa10.02□□□□□ -0.8
TRIM39-202ENST00000376659 SENP1Q9P0U3 644 aa10.02□□□□□ -0.8
TRIM39-202ENST00000376659 TRIM33Q9UPN9 1127 aa10.02□□□□□ -0.8
TRIM39-202ENST00000376659 THSD7BQ9C0I4 1608 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 CFAP73A6NFT4 308 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 SMAPO00193 183 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 HCRTO43612 131 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 KIF1CO43896 1103 aaKnown RBP10.02□□□□□ -0.81
TRIM39-202ENST00000376659 SMPD1P17405 629 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 CCNG1P51959 295 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 MRPS5P82675 430 aaKnown RBP10.02□□□□□ -0.81
TRIM39-202ENST00000376659 TNFAIP2Q03169 654 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 TTLL4Q14679 1199 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 CENPUQ71F23 418 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 OTOAQ7RTW8 1153 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 PRPF39Q86UA1 669 aaKnown RBP10.02□□□□□ -0.81
TRIM39-202ENST00000376659 CHSY1Q86X52 802 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 TTC13Q8NBP0 860 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 PAFAH2Q99487 392 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 MYLK2Q9H1R3 596 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 LRMDAQ9H2I8 198 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 NXF1Q9UBU9 619 aaKnown RBP10.02□□□□□ -0.81
TRIM39-202ENST00000376659 TUBGCP4Q9UGJ1 667 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 A8MUI8 341 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 GOLGA8SH3BPF8 625 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 M0QYV0 167 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 PIRO00625 290 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 SPAG7O75391 227 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 UNC5CO95185 931 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 PRKCGP05129 697 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 GPD1P21695 349 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 SCNN1AP37088 669 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 CSRP3P50461 194 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 TRPC3Q13507 836 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 LAMC2Q13753 1193 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 TMEM132DQ14C87 1099 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 DPYSL2Q16555 572 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 KYAT1Q16773 422 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 TEX44Q53QW1 395 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 HP1BP3Q5SSJ5 553 aaPredicted RBP10.02□□□□□ -0.81
TRIM39-202ENST00000376659 UBXN11Q5T124 520 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 FAM182AQ5T1J6 154 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 NUGGCQ68CJ6 796 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 ANKMY2Q8IV38 441 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 FBF1Q8TES7 1133 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 STK32AQ8WU08 396 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 OXNAD1Q96HP4 312 aaPredicted RBP10.02□□□□□ -0.81
TRIM39-202ENST00000376659 LPIN3Q9BQK8 851 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 MAGEB5Q9BZ81 275 aa10.02□□□□□ -0.81
TRIM39-202ENST00000376659 TCRBV9S1A1TA0A576 114 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 NDC80O14777 642 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 SPTLC1O15269 473 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 ATP2C2O75185 946 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 DGKIO75912 1065 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 L1CAMP32004 1257 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 LACTBP83111 547 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms