RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 KCNJ2P63252 427 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 SARNPP82979 210 aaKnown RBP12.16□□□□□ -0.46
DDR1-227ENST00000376570 LAMC2Q13753 1193 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 SURF1Q15526 300 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 LRRC6Q86X45 466 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 SLC25A41Q8N5S1 370 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 CCT8L1PA6NM43 557 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 MSCO60682 206 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 LRCH4O75427 683 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 STK10O94804 968 aaKnown RBP12.15□□□□□ -0.46
DDR1-227ENST00000376570 ENO1P06733 434 aaKnown RBP12.15□□□□□ -0.46
DDR1-227ENST00000376570 CETPP11597 493 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 MUTP22033 750 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 ECHS1P30084 290 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 MLH1P40692 756 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 GBE1Q04446 702 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 FAAP100Q0VG06 881 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 KBTBD12Q3ZCT8 623 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 ANKRD20A8PQ5CZ79 823 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 MON1BQ7L1V2 547 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 SPNS2Q8IVW8 549 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 NDUFAF2Q8N183 169 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 SPATA6LQ8N4H0 392 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 CCNYL1Q8N7R7 359 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 PNPLA1Q8N8W4 532 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 ATP11CQ8NB49 1132 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 TSNARE1Q96NA8 513 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 OSBPL7Q9BZF2 842 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 KLC2Q9H0B6 622 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 GBA2Q9HCG7 927 aaPredicted RBP12.15□□□□□ -0.46
DDR1-227ENST00000376570 ABI2Q9NYB9 513 aaPredicted RBP12.15□□□□□ -0.46
DDR1-227ENST00000376570 MAFBQ9Y5Q3 323 aaPredicted RBP12.15□□□□□ -0.46
DDR1-227ENST00000376570 MMP8P22894 467 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 HOXA7P31268 230 aaPredicted RBP12.15□□□□□ -0.46
DDR1-227ENST00000376570 ACVR2BQ13705 512 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 SLC10A6Q3KNW5 377 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 CCDC62Q6P9F0 684 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 RASGEF1CQ8N431 466 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 EXD1Q8NHP7 514 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 B3GALT6Q96L58 329 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 LRRC37BQ96QE4 947 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 FAM129AQ9BZQ8 928 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 SPC25Q9HBM1 224 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 MEIS3P2A8K0S8 358 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 TRAPPC3O43617 180 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 PMPCBO75439 489 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 DGKIO75912 1065 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 USP17L7P0C7H9 530 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 UNGP13051 313 aaPredicted RBP12.15□□□□□ -0.46
DDR1-227ENST00000376570 ANXA13P27216 316 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 CALRP27797 417 aaKnown RBP12.15□□□□□ -0.46
DDR1-227ENST00000376570 VCPP55072 806 aaKnown RBP12.15□□□□□ -0.46
DDR1-227ENST00000376570 CCNG2Q16589 344 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 HABP4Q5JVS0 413 aaKnown RBP12.15□□□□□ -0.46
DDR1-227ENST00000376570 AGBL2Q5U5Z8 902 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 POLNQ7Z5Q5 900 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 TLK2Q86UE8 772 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 DEFB106AQ8N104 65 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 ZCWPW1Q9H0M4 648 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 ZNF395Q9H8N7 513 aaPredicted RBP12.15□□□□□ -0.46
DDR1-227ENST00000376570 FAM8A1Q9UBU6 413 aa12.15□□□□□ -0.46
DDR1-227ENST00000376570 USP15Q9Y4E8 981 aaPredicted RBP12.15□□□□□ -0.46
DDR1-227ENST00000376570 CYB561D2O14569 222 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 LIASO43766 372 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 LYPLA2O95372 231 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 OR4Q2P0C623 313 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 KDELR1P24390 212 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 TFDP2Q14188 446 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 MUM1Q2TAK8 710 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 FNBP1LQ5T0N5 605 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 TRMT10CQ7L0Y3 403 aaKnown RBP12.14□□□□□ -0.47
DDR1-227ENST00000376570 ARID3BQ8IVW6 561 aaPredicted RBP12.14□□□□□ -0.47
DDR1-227ENST00000376570 SUGP1Q8IWZ8 645 aaKnown RBP12.14□□□□□ -0.47
DDR1-227ENST00000376570 CNPY4Q8N129 248 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 TCP10LQ8TDR4 215 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 PPP4R1Q8TF05 950 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 DDX1Q92499 740 aaKnown RBP12.14□□□□□ -0.47
DDR1-227ENST00000376570 SLC17A7Q9P2U7 560 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 BCORQ6W2J9 1755 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 CDK5RAP2Q96SN8 1893 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 TMEM191CA6NGB0 347 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 SLC26A4O43511 780 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 UGT1A9O60656 530 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 AP1G2O75843 785 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 ANP32DO95626 131 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 EPHB2P29323 1055 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 ATN1P54259 1190 aaPredicted RBP12.14□□□□□ -0.47
DDR1-227ENST00000376570 SKOR1P84550 965 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 CENPCQ03188 943 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 DEUP1Q05D60 604 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 UGT1A7Q9HAW7 530 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 UGT1A10Q9HAW8 530 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 UGT1A8Q9HAW9 530 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 PTPRHQ9HD43 1115 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 CYTH4Q9UIA0 394 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 CCDC160A6NGH7 325 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 SHOX2O60902 331 aaPredicted RBP12.14□□□□□ -0.47
DDR1-227ENST00000376570 YBX3P16989 372 aaKnown RBP eCLIP12.14□□□□□ -0.474e-7■□□□□ 9.7
DDR1-227ENST00000376570 GOT1P17174 413 aa12.14□□□□□ -0.47
DDR1-227ENST00000376570 SP100P23497 879 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms