RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 TRPA1O75762 1119 aa21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 EEF2P13639 858 aaKnown RBP21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 ANKRD22Q5VYY1 191 aa21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 ELMSAN1Q6PJG2 1045 aa21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 RHOT1Q8IXI2 618 aa21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 ZSWIM2Q8NEG5 633 aa21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 HNRNPABQ99729 332 aaKnown RBP21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 ZNHIT2Q9UHR6 403 aa21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 KBTBD6Q86V97 674 aa21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 PALM2Q8IXS6 379 aa21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 RTKN2Q8IZC4 609 aa21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 MCOLN2Q8IZK6 566 aa21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 CPA5Q8WXQ8 436 aa21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 DHX38Q92620 1227 aaKnown RBP21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 E2F7Q96AV8 911 aa21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 CSRNP1Q96S65 589 aa21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 GINM1Q9NU53 330 aa21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 RAB26Q9ULW5 256 aa21.41■■□□□ 1.02
TMEFF1-201ENST00000374879 SDR42E2A6NKP2 422 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 ADCY6O43306 1168 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 PROSCO94903 275 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 THRAP10827 490 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 CHI3L2Q15782 390 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 CIAPIN1Q6FI81 312 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 SLC30A10Q6XR72 485 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 KATNAL2Q8IYT4 538 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 TAB3Q8N5C8 712 aaPredicted RBP21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 DEPTORQ8TB45 409 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 SRPK1Q96SB4 655 aaKnown RBP21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 P2RX7Q99572 595 aaKnown RBP21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 TMEM121Q9BTD3 319 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 SELENONQ9NZV5 590 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 SUN2Q9UH99 717 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 TMED5Q9Y3A6 229 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 LTBP1Q14766 1721 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 POLRMTO00411 1230 aaKnown RBP21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 FAM58BPP0C7Q3 252 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 TGFBIQ15582 683 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 USP41Q3LFD5 358 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 C6orf52Q5T4I8 152 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 TRIM50Q86XT4 487 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 ZFPM1Q8IX07 1006 aa21.4■■□□□ 1.02
TMEFF1-201ENST00000374879 UBR3Q6ZT12 1888 aa21.39■■□□□ 1.02
TMEFF1-201ENST00000374879 IQANK1A0A1B0GTG1 560 aa21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 PSTPIP1O43586 416 aa21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 CSDE1O75534 798 aaKnown RBP21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 ATF7P17544 494 aaPredicted RBP21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 MFAP3P55082 362 aa21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 SHROOM1Q2M3G4 852 aaPredicted RBP21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 ODR4Q5SWX8 454 aa21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 MFSD4BQ5TF39 518 aa21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 PQLC1Q8N2U9 271 aa21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 SEMA4DQ92854 862 aa21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 LENG9Q96B70 501 aa21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 CYB561D2O14569 222 aa21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 ADAM23O75077 832 aa21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 NFX1Q12986 1120 aaKnown RBP21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 PDK1Q15118 436 aa21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 APOBEC3HQ6NTF7 200 aaKnown RBP21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 SLC9A9Q8IVB4 645 aa21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 EXD1Q8NHP7 514 aa21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 ACTRT2Q8TDY3 377 aa21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 TEKT1Q969V4 418 aa21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 GLT8D2Q9H1C3 349 aa21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 CLEC11AQ9Y240 323 aa21.39■■□□□ 1.01
TMEFF1-201ENST00000374879 FAM86B1E9PN63 330 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 SGK1O00141 431 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 COPEO14579 308 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 FAM86B2P0C5J1 330 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 COPAP53621 1224 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 CRLF3Q8IUI8 442 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 VPS50Q96JG6 964 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 FAM81BQ96LP2 452 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 CCT7Q99832 543 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 OSBPL6Q9BZF3 934 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 ADAMTSL1Q8N6G6 1762 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 KLRG2A4D1S0 409 aaPredicted RBP21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 P4HA2O15460 535 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 CIITAP33076 1130 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 CDK9P50750 372 aaKnown RBP21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 PEX6Q13608 980 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 TEX44Q53QW1 395 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 ZFYVE27Q5T4F4 411 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 ATG16L1Q676U5 607 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 DHRS4L2Q6PKH6 230 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 ARMCX6Q7L4S7 300 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 TPH2Q8IWU9 490 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 DEFB107AQ8IZN7 70 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 COX4I2Q96KJ9 171 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 CCDC17Q96LX7 622 aa21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 MPHOSPH6Q99547 160 aaKnown RBP21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 GNEQ9Y223 722 aaKnown RBP21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 FARP1Q9Y4F1 1045 aaPredicted RBP21.38■■□□□ 1.01
TMEFF1-201ENST00000374879 MXI1P50539 228 aa21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 MAP7D1Q3KQU3 841 aa21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 BBS9Q3SYG4 887 aa21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 PPP1R10Q96QC0 940 aaKnown RBP21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 VAV3Q9UKW4 847 aa21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 LRRC37AA6NMS7 1700 aa21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 FUOMA2VDF0 154 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms