RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 ZC3H11AO75152 810 aaKnown RBP eCLIP11.92□□□□□ -0.54e-7■□□□□ 9.7
VCL-202ENST00000372755 RPLP2P05387 115 aaKnown RBP11.92□□□□□ -0.5
VCL-202ENST00000372755 PEX5P50542 639 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 RPL10AP62906 217 aaKnown RBP11.92□□□□□ -0.5
VCL-202ENST00000372755 MMRN1Q13201 1228 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 NFYCQ13952 458 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 DAGLBQ8NCG7 672 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 ANKRD49Q8WVL7 239 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 KCNB2Q92953 911 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 FBXO32Q969P5 355 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 KCNF1Q9H3M0 494 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 RGS5O15539 181 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 HSD17B3P37058 310 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 DNAJC3Q13217 504 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 EPC2Q52LR7 807 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 FBXO36Q8NEA4 188 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 THAP2Q9H0W7 228 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 POLE3Q9NRF9 147 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 RAD18Q9NS91 495 aa11.92□□□□□ -0.5
VCL-202ENST00000372755 GEMIN8Q9NWZ8 242 aaKnown RBP11.92□□□□□ -0.5
VCL-202ENST00000372755 MBD5Q9P267 1494 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 MGAT4DA6NG13 374 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 HPGDP15428 266 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 MAPK7Q13164 816 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 PGS1Q32NB8 556 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 KDM7AQ6ZMT4 941 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 RINLQ6ZS11 566 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 SLFN11Q7Z7L1 901 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 GANQ9H2C0 597 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 UTP6Q9NYH9 597 aaKnown RBP11.91□□□□□ -0.5
VCL-202ENST00000372755 WHRNQ9P202 907 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 TTLL13PA6NNM8 815 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 FCGR1AP12314 374 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 TFE3P19532 575 aaPredicted RBP11.91□□□□□ -0.5
VCL-202ENST00000372755 SERPINB5P36952 375 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 KLK7P49862 253 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 IRAK1P51617 712 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 ARMCX4Q5H9R4 360 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 CYP4Z2PQ8N1L4 340 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 ST13P5Q8NFI4 369 aaPredicted RBP11.91□□□□□ -0.5
VCL-202ENST00000372755 L3MBTL3Q96JM7 780 aaPredicted RBP11.91□□□□□ -0.5
VCL-202ENST00000372755 RGS18Q9NS28 235 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 DLGAP2Q9P1A6 1054 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 PURAQ00577 322 aaKnown RBP11.91□□□□□ -0.5
VCL-202ENST00000372755 ILF2Q12905 390 aaKnown RBP11.91□□□□□ -0.5
VCL-202ENST00000372755 ATP6AP1LQ52LC2 224 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 ALFQ53S48 1182 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 SEL1L3Q68CR1 1132 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 HERC6Q8IVU3 1022 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 SLC20A1Q8WUM9 679 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 APBB2Q92870 758 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 VPS33AQ96AX1 596 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 PABPC3Q9H361 631 aaKnown RBP11.91□□□□□ -0.5
VCL-202ENST00000372755 IARS2Q9NSE4 1012 aaKnown RBP11.91□□□□□ -0.5
VCL-202ENST00000372755 GTF2A1LQ9UNN4 478 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 NBPF26B4DH59 902 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 ACO1P21399 889 aaKnown RBP11.91□□□□□ -0.5
VCL-202ENST00000372755 SHROOM1Q2M3G4 852 aaPredicted RBP11.91□□□□□ -0.5
VCL-202ENST00000372755 PRR5LQ6MZQ0 368 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 ANKRD13AQ8IZ07 590 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 CARNMT1Q8N4J0 409 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 NBPF15Q8N660 670 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 TAAR1Q96RJ0 339 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 PDGFCQ9NRA1 345 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 TARSP26639 723 aaKnown RBP11.91□□□□□ -0.5
VCL-202ENST00000372755 RFX3P48380 749 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 TFDP3Q5H9I0 405 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 MYOZ2Q9NPC6 264 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 HEY2Q9UBP5 337 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 ADGRA3Q8IWK6 1321 aa11.91□□□□□ -0.5
VCL-202ENST00000372755 A0A0G2JLW4 131 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 NCF1BA6NI72 391 aaPredicted RBP11.9□□□□□ -0.5
VCL-202ENST00000372755 NCF1CA8MVU1 366 aaPredicted RBP11.9□□□□□ -0.5
VCL-202ENST00000372755 E9PBE3 544 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 TPST1O60507 370 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 NCF1P14598 390 aaPredicted RBP11.9□□□□□ -0.5
VCL-202ENST00000372755 PSMC3P17980 439 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 THPOP40225 353 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 MKRN4PQ13434 485 aaPredicted RBP11.9□□□□□ -0.5
VCL-202ENST00000372755 MPZL3Q6UWV2 235 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 ZNF34Q8IZ26 560 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 DPP10Q8N608 796 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 ARMC7Q9H6L4 198 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 PDZK1P1A8MUH7 402 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 CNOT3O75175 753 aaKnown RBP11.9□□□□□ -0.5
VCL-202ENST00000372755 ERVK-10P10266 1014 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 ATP6V1B1P15313 513 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 NAMPTP43490 491 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 KPNA1P52294 538 aaPredicted RBP11.9□□□□□ -0.5
VCL-202ENST00000372755 BCAT1P54687 386 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 GJB7Q6PEY0 223 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 GLMNQ92990 594 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 SAC3D1A6NKF1 404 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 C2CD2LO14523 706 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 ICAM1P05362 532 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.5
VCL-202ENST00000372755 CLEC10AQ8IUN9 316 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 LRRC34Q8IZ02 419 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 PPP1R14AQ96A00 147 aa11.9□□□□□ -0.5
VCL-202ENST00000372755 ACSF2Q96CM8 615 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms