RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 RPS6KB2Q9UBS0 482 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 WDR47O94967 919 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 GSNP06396 782 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 CD44P16070 742 aaKnown RBP10.14□□□□□ -0.79
COL4A6-202ENST00000372216 GUCY2CP25092 1073 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 HIBCHQ6NVY1 386 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-202ENST00000372216 SLFN11Q7Z7L1 901 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 DIS3LQ8TF46 1054 aaKnown RBP10.14□□□□□ -0.79
COL4A6-202ENST00000372216 RUBCNQ92622 972 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 PRMT1Q99873 361 aaKnown RBP10.14□□□□□ -0.79
COL4A6-202ENST00000372216 EMILIN2Q9BXX0 1053 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 FAM129AQ9BZQ8 928 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 GOLPH3Q9H4A6 298 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 ZNF556Q9HAH1 456 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 NEUROD4Q9HD90 331 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 FAM198AQ9UFP1 575 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 PSTPIP1O43586 416 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 RNASEH1O60930 286 aaKnown RBP10.14□□□□□ -0.79
COL4A6-202ENST00000372216 ANXA9O76027 345 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 FBXO21O94952 628 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 KDSRQ06136 332 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 PTK7Q13308 1070 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 MAPRE2Q15555 327 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 TRADDQ15628 312 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 C2CD6Q53TS8 623 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 LINC00523Q86TU6 105 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 TC2NQ8N9U0 490 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 MED8Q96G25 268 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 UNKQ9C0B0 810 aaKnown RBP10.14□□□□□ -0.79
COL4A6-202ENST00000372216 PSMC3IPQ9P2W1 217 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-202ENST00000372216 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.14□□□□□ -0.79
COL4A6-202ENST00000372216 GMNCA6NCL1 334 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 NUDT14O95848 222 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 ATP6V1C1P21283 382 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 ITGA8P53708 1063 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 GEMP55040 296 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 PSMC6P62333 389 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 CCZ1BP86790 482 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 CCZ1P86791 482 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-202ENST00000372216 PTK6Q13882 451 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 FAM172AQ8WUF8 416 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 RANBP17Q9H2T7 1088 aaKnown RBP10.14□□□□□ -0.79
COL4A6-202ENST00000372216 SEMA6BQ9H3T3 888 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 GPATCH2LQ9NWQ4 482 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 ZNF229Q9UJW7 825 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 FAM86B1E9PN63 330 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 FAM86B2P0C5J1 330 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 TP53BP2Q13625 1128 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 BOLA3Q53S33 107 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 FBXO47Q5MNV8 452 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 TTC39BQ5VTQ0 682 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-202ENST00000372216 RAD9BQ6WBX8 426 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 CYP2W1Q8TAV3 490 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 TMC2Q8TDI7 906 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 TLR8Q9NR97 1041 aaKnown RBP10.13□□□□□ -0.79
COL4A6-202ENST00000372216 SNX8Q9Y5X2 465 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 ATP5HO75947 161 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 PARNO95453 639 aaKnown RBP10.13□□□□□ -0.79
COL4A6-202ENST00000372216 FYNP06241 537 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 SFSWAPQ12872 951 aaKnown RBP10.13□□□□□ -0.79
COL4A6-202ENST00000372216 GALNTL6Q49A17 601 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 C4orf22Q6V702 233 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 CATSPERGQ6ZRH7 1159 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 NT5DC4Q86YG4 428 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 CLEC4FQ8N1N0 589 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 SLC5A5Q92911 643 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 ERGIC2Q96RQ1 377 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 MOXD2PA6NHM9 499 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 KDM1AO60341 852 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 RASSF9O75901 435 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 ENO3P13929 434 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-202ENST00000372216 CYP11B1P15538 503 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 HOXA10P31260 410 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-202ENST00000372216 SPRP35270 261 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-202ENST00000372216 GUCA1AP43080 201 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-202ENST00000372216 JAMLQ86YT9 394 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 ASZ1Q8WWH4 475 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 C9orf72Q96LT7 481 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 PTPRHQ9HD43 1115 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 RBM12Q9NTZ6 932 aaKnown RBP10.13□□□□□ -0.79
COL4A6-202ENST00000372216 HEATR9A2RTY3 570 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 C2orf81A6NN90 581 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 RHOCP08134 193 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 ENO2P09104 434 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-202ENST00000372216 FDFT1P37268 417 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 BST2Q10589 180 aaKnown RBP10.13□□□□□ -0.79
COL4A6-202ENST00000372216 STARD3Q14849 445 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 FAM171A1Q5VUB5 890 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 IQSEC1Q6DN90 963 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 PPIL6Q8IXY8 311 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 KCNB2Q92953 911 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 FAM167BQ9BTA0 163 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 PIF1Q9H611 641 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 ECT2Q9H8V3 914 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 DDX28Q9NUL7 540 aaKnown RBP10.13□□□□□ -0.79
COL4A6-202ENST00000372216 DPP7Q9UHL4 492 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 STX7O15400 261 aaKnown RBP10.13□□□□□ -0.79
COL4A6-202ENST00000372216 GMFGO60234 142 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 MAN1A2O60476 641 aa10.13□□□□□ -0.79
COL4A6-202ENST00000372216 RBP3P10745 1247 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms