RNA–Protein interactions for RNA: ENST00000370817.3

COL21A1-202, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 3

Gene COL21A1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-202ENST00000370817 ENPEPQ07075 957 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 USP41Q3LFD5 358 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 OGFOD2Q6N063 350 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 TTI2Q6NXR4 508 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 TMEM184AQ6ZMB5 413 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.79□□□□□ -1
COL21A1-202ENST00000370817 WDR49Q8IV35 697 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 EFHBQ8N7U6 833 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 FAM181AQ8N9Y4 354 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 BEST2Q8NFU1 509 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 OR5B17Q8NGF7 314 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 PARD3BQ8TEW8 1205 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 SLC22A17Q8WUG5 538 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 AUTS2Q8WXX7 1259 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 PABPC5Q96DU9 382 aaKnown RBP8.79□□□□□ -1
COL21A1-202ENST00000370817 B3GALT6Q96L58 329 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 MED15Q96RN5 788 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 CDCA3Q99618 268 aaPredicted RBP8.79□□□□□ -1
COL21A1-202ENST00000370817 CGRRF1Q99675 332 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 DUSP9Q99956 384 aaKnown RBP8.79□□□□□ -1
COL21A1-202ENST00000370817 INTS13Q9NVM9 706 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 FNIP2Q9P278 1114 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 PUF60Q9UHX1 559 aaKnown RBP8.79□□□□□ -1
COL21A1-202ENST00000370817 MYH10P35580 1976 aa8.79□□□□□ -1
COL21A1-202ENST00000370817 ARID1BQ8NFD5 2236 aaPredicted RBP8.78□□□□□ -1
COL21A1-202ENST00000370817 ANAPC1Q9H1A4 1944 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 KRTAP4-8A0A0G2JLE6 195 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 TRIM49BA6NDI0 452 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 LRRIQ3A6PVS8 624 aaPredicted RBP8.78□□□□□ -1
COL21A1-202ENST00000370817 LINC01565O15544 149 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 CALUO43852 315 aaPredicted RBP8.78□□□□□ -1
COL21A1-202ENST00000370817 CLASP2O75122 1294 aaKnown RBP8.78□□□□□ -1
COL21A1-202ENST00000370817 TADA2AO75478 443 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 AKAP3O75969 853 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 C1RP00736 705 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 CNPP09543 421 aaKnown RBP8.78□□□□□ -1
COL21A1-202ENST00000370817 JUNBP17275 347 aaPredicted RBP8.78□□□□□ -1
COL21A1-202ENST00000370817 NR2F2P24468 414 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 CCNE1P24864 410 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 TKTP29401 623 aaKnown RBP8.78□□□□□ -1
COL21A1-202ENST00000370817 MCM4P33991 863 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 PPP1R2P41236 205 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 LILRA4P59901 499 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 LRRC63Q05C16 580 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 ELAVL2Q12926 359 aaKnown RBP8.78□□□□□ -1
COL21A1-202ENST00000370817 ADAM15Q13444 863 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 SURF1Q15526 300 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 CCDC85BQ15834 202 aaPredicted RBP8.78□□□□□ -1
COL21A1-202ENST00000370817 CAMK4Q16566 473 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 ANKRD40Q6AI12 368 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 C15orf39Q6ZRI6 1047 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 LIMS2Q7Z4I7 341 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 PLD6Q8N2A8 252 aaKnown RBP8.78□□□□□ -1
COL21A1-202ENST00000370817 LNX1Q8TBB1 728 aaPredicted RBP8.78□□□□□ -1
COL21A1-202ENST00000370817 STK35Q8TDR2 534 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 ASIC4Q96FT7 647 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 DHTKD1Q96HY7 919 aaPredicted RBP8.78□□□□□ -1
COL21A1-202ENST00000370817 MSLNLQ96KJ4 702 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 KLHL5Q96PQ7 755 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 BCO2Q9BYV7 579 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 MTMR12Q9C0I1 747 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 NUP62CLQ9H1M0 184 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 ENTPD7Q9NQZ7 604 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 DPP3Q9NY33 737 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 CLEC1BQ9P126 229 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 ITGA11Q9UKX5 1188 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 U3KQE9 123 aa8.78□□□□□ -1
COL21A1-202ENST00000370817 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.77□□□□□ -1.01
COL21A1-202ENST00000370817 FSD2A1L4K1 749 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 I3L4J1 428 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 BIN1O00499 593 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 SYN3O14994 580 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 TEX28O15482 410 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 NCK2O43639 380 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 EXOC3O60645 756 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 CSPG5O95196 566 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 CXCL14O95715 111 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 MBD3O95983 291 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 C4BPAP04003 597 aaKnown RBP8.77□□□□□ -1.01
COL21A1-202ENST00000370817 ITGB3P05106 788 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 URODP06132 367 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 CDK11BP21127 795 aaKnown RBP8.77□□□□□ -1.01
COL21A1-202ENST00000370817 PAX3P23760 479 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 NRIP1P48552 1158 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 CLCN4P51793 760 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 DLG4P78352 724 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 RBM10P98175 930 aaKnown RBP8.77□□□□□ -1.01
COL21A1-202ENST00000370817 DLX2Q07687 328 aaPredicted RBP8.77□□□□□ -1.01
COL21A1-202ENST00000370817 BNIP3Q12983 259 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 FAM171A1Q5VUB5 890 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 LMBRD2Q68DH5 695 aaPredicted RBP8.77□□□□□ -1.01
COL21A1-202ENST00000370817 ISM2Q6H9L7 571 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 LILRA6Q6PI73 481 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 PRSS55Q6UWB4 352 aaPredicted RBP8.77□□□□□ -1.01
COL21A1-202ENST00000370817 RSPO2Q6UXX9 243 aaPredicted RBP8.77□□□□□ -1.01
COL21A1-202ENST00000370817 LRRC52Q8N7C0 313 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 CLSTN3Q9BQT9 956 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 TTPALQ9BTX7 342 aa8.77□□□□□ -1.01
COL21A1-202ENST00000370817 UBE2ZQ9H832 354 aaPredicted RBP8.77□□□□□ -1.01
COL21A1-202ENST00000370817 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms