RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 RBBP6Q7Z6E9 1792 aaKnown RBP12.8□□□□□ -0.36
PHGDH-201ENST00000369407 A0A088AWK7 358 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 MYOCOSA0A1B0GUC4 107 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 CCDC160A6NGH7 325 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 HNRNPRO43390 633 aaKnown RBP12.8□□□□□ -0.36
PHGDH-201ENST00000369407 TOM1L1O75674 476 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 EIF3EP60228 445 aaKnown RBP12.8□□□□□ -0.36
PHGDH-201ENST00000369407 MRPS5P82675 430 aaKnown RBP12.8□□□□□ -0.36
PHGDH-201ENST00000369407 C1QBPQ07021 282 aaKnown RBP12.8□□□□□ -0.36
PHGDH-201ENST00000369407 MSLNQ13421 630 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-201ENST00000369407 MROH9Q5TGP6 573 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 OLFML2BQ68BL8 750 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 C16orf46Q6P387 395 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 DNAJC14Q6Y2X3 702 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-201ENST00000369407 C15orf39Q6ZRI6 1047 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 SPATA24Q86W54 205 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 CHSY1Q86X52 802 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 CCDC33Q8N5R6 958 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 ARFGAP1Q8N6T3 406 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 SLC44A1Q8WWI5 657 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 PPP2R3CQ969Q6 453 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 HAPLN2Q9GZV7 340 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 VCX3BQ9H321 246 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 VCX3AQ9NNX9 186 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 PCDHGB4Q9UN71 923 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 PCDHGB5Q9Y5G0 923 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 E2F8A0AVK6 867 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 F5H423 210 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-201ENST00000369407 SERPINB6P35237 376 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 GPAT2Q6NUI2 795 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 POLNQ7Z5Q5 900 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 TMEM130Q8N3G9 435 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 NAT14Q8WUY8 206 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 MASTLQ96GX5 879 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 MPP4Q96JB8 637 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 IDI2Q9BXS1 227 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 GABBR1Q9UBS5 961 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 SLC9A2Q9UBY0 812 aa12.8□□□□□ -0.36
PHGDH-201ENST00000369407 MYH9P35579 1960 aaKnown RBP12.8□□□□□ -0.36
PHGDH-201ENST00000369407 C3orf70A6NLC5 250 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-201ENST00000369407 F8W8V4 182 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 CST3P01034 146 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-201ENST00000369407 RBP3P10745 1247 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 HOXA10P31260 410 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-201ENST00000369407 GMPRP36959 345 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 USP46P62068 366 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 MED21Q13503 144 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 DPYSL3Q14195 570 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 TRIP10Q15642 601 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 GDPD5Q8WTR4 605 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 CCDC106Q9BWC9 280 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 S100A14Q9HCY8 104 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 KCNK4Q9NYG8 393 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 PCDHGA4Q9Y5G9 962 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 SIPA1L1O43166 1804 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 PIK3R2O00459 728 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 SLC18A2Q05940 514 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 MYBPC3Q14896 1274 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 GRAMD1BQ3KR37 738 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 RAB6CQ53S08 254 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 PCGF5Q86SE9 256 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 CHURC1Q8WUH1 139 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 TMEM174Q8WUU8 243 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 GCNAQ96QF7 691 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 RAB6CQ9H0N0 254 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 PPCSQ9HAB8 311 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 RAVER2Q9HCJ3 691 aaKnown RBP12.79□□□□□ -0.36
PHGDH-201ENST00000369407 SMYD2Q9NRG4 433 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 DDX18Q9NVP1 670 aaKnown RBP12.79□□□□□ -0.36
PHGDH-201ENST00000369407 RBAKQ9NYW8 714 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-201ENST00000369407 SLC17A6Q9P2U8 582 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 STRCQ7RTU9 1775 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 A0A0B4J269 797 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 ITM2AO43736 263 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 PROCP04070 461 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 VAV1P15498 845 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 MTA1Q13330 715 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 LSAMPQ13449 338 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 HIC1Q14526 733 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 MMEL1Q495T6 779 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 VWA5B1Q5TIE3 1220 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 DARS2Q6PI48 645 aaKnown RBP12.79□□□□□ -0.36
PHGDH-201ENST00000369407 C1orf228Q6PIY5 440 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 PAOXQ6QHF9 649 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 DHDDSQ86SQ9 333 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 PDSS2Q86YH6 399 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 CRLF3Q8IUI8 442 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 WDTC1Q8N5D0 677 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 SPATA18Q8TC71 538 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 TMEM143Q96AN5 459 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 HIC2Q96JB3 615 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 PHF12Q96QT6 1004 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 WWP1Q9H0M0 922 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 AGO2Q9UKV8 859 aaKnown RBP12.79□□□□□ -0.36
PHGDH-201ENST00000369407 PLLPQ9Y342 182 aa12.79□□□□□ -0.36
PHGDH-201ENST00000369407 NFASCO94856 1347 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 STIP1P31948 543 aaKnown RBP12.78□□□□□ -0.36
PHGDH-201ENST00000369407 TTLL12Q14166 644 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-201ENST00000369407 EFHC1Q5JVL4 640 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 FBXL19Q6PCT2 694 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms