RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 TMEM270Q6UE05 265 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 YAF2Q8IY57 180 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 CMTM8Q8IZV2 173 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 ARL14EPQ8N8R7 260 aaPredicted RBP15.51■□□□□ 0.07
SF3B5-201ENST00000367569 ZBTB44Q8NCP5 570 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 FAM3CQ92520 227 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 USP13Q92995 863 aaPredicted RBP15.51■□□□□ 0.07
SF3B5-201ENST00000367569 FBXO32Q969P5 355 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 RMDN1Q96DB5 314 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 TMEM176AQ96HP8 235 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 MYRFLQ96LU7 910 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 KREMEN1Q96MU8 473 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 THAP9Q9H5L6 903 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 NFE2L3Q9Y4A8 694 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 PCDHGA2Q9Y5H1 932 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 PIAS3Q9Y6X2 628 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 KCNJ18B7U540 433 aa15.5■□□□□ 0.07
SF3B5-201ENST00000367569 TULP2O00295 520 aa15.5■□□□□ 0.07
SF3B5-201ENST00000367569 CYP26A1O43174 497 aa15.5■□□□□ 0.07
SF3B5-201ENST00000367569 BRD2P25440 801 aaKnown RBP15.5■□□□□ 0.07
SF3B5-201ENST00000367569 TNK2Q07912 1038 aa15.5■□□□□ 0.07
SF3B5-201ENST00000367569 KCNJ12Q14500 433 aa15.5■□□□□ 0.07
SF3B5-201ENST00000367569 NUP93Q8N1F7 819 aa15.5■□□□□ 0.07
SF3B5-201ENST00000367569 RBBP8NLQ8NC74 664 aaPredicted RBP15.5■□□□□ 0.07
SF3B5-201ENST00000367569 EHBP1Q8NDI1 1231 aa15.5■□□□□ 0.07
SF3B5-201ENST00000367569 ATRIPQ8WXE1 791 aa15.5■□□□□ 0.07
SF3B5-201ENST00000367569 E2F7Q96AV8 911 aa15.5■□□□□ 0.07
SF3B5-201ENST00000367569 HNRNPABQ99729 332 aaKnown RBP15.5■□□□□ 0.07
SF3B5-201ENST00000367569 TTLL2Q9BWV7 592 aa15.5■□□□□ 0.07
SF3B5-201ENST00000367569 CHRDQ9H2X0 955 aa15.5■□□□□ 0.07
SF3B5-201ENST00000367569 LMAN1LQ9HAT1 526 aa15.5■□□□□ 0.07
SF3B5-201ENST00000367569 PRMT8Q9NR22 394 aaPredicted RBP15.5■□□□□ 0.07
SF3B5-201ENST00000367569 ZSCAN32Q9NX65 697 aa15.5■□□□□ 0.07
SF3B5-201ENST00000367569 SMPD4Q9NXE4 827 aa15.5■□□□□ 0.07
SF3B5-201ENST00000367569 TRPM5Q9NZQ8 1165 aa15.5■□□□□ 0.07
SF3B5-201ENST00000367569 TRAV19A0A0A6YYK7 116 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 FAM170AA1A519 330 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 HHLA1C9JL84 531 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 RNF225M0QZC1 329 aaPredicted RBP15.49■□□□□ 0.07
SF3B5-201ENST00000367569 TNFRSF10BO14763 440 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 LILRB5O75023 590 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 PNMA6AP0CW24 399 aaPredicted RBP15.49■□□□□ 0.07
SF3B5-201ENST00000367569 KRT5P13647 590 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 TRIM21P19474 475 aaKnown RBP15.49■□□□□ 0.07
SF3B5-201ENST00000367569 ACO1P21399 889 aaKnown RBP15.49■□□□□ 0.07
SF3B5-201ENST00000367569 TBXAS1P24557 533 aaPredicted RBP15.49■□□□□ 0.07
SF3B5-201ENST00000367569 YWHAQP27348 245 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 ERCC5P28715 1186 aaPredicted RBP15.49■□□□□ 0.07
SF3B5-201ENST00000367569 TYRO3Q06418 890 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 FCHO2Q0JRZ9 810 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 CETN1Q12798 172 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 MAN2A1Q16706 1144 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 ARHGAP44Q17R89 818 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 MIIPQ5JXC2 388 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 TRIM68Q6AZZ1 485 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 TRIM65Q6PJ69 517 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 ERMP1Q7Z2K6 904 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 MON1AQ86VX9 555 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 TTC30AQ86WT1 665 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 UBA3Q8TBC4 463 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 TFAP2BQ92481 460 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 TSPAN16Q9UKR8 245 aa15.49■□□□□ 0.07
SF3B5-201ENST00000367569 ZNF840PA6NDX5 716 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 PIK3R2O00459 728 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 CHADO15335 359 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 P4HA2O15460 535 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 CHRNB1P11230 501 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 TDGF1P13385 188 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 YWHAEP62258 255 aaKnown RBP15.48■□□□□ 0.07
SF3B5-201ENST00000367569 SGO2Q562F6 1265 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 FAM114A1Q8IWE2 563 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 AOPEPQ8N6M6 819 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 BPIFB1Q8TDL5 484 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 CSGALNACT1Q8TDX6 532 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 SLITRK1Q96PX8 696 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 ZSWIM1Q9BR11 485 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 TUBGCP2Q9BSJ2 902 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 CCSER2Q9H7U1 834 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 UBE2TQ9NPD8 197 aaPredicted RBP15.48■□□□□ 0.07
SF3B5-201ENST00000367569 ACP6Q9NPH0 428 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 ANO10Q9NW15 660 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 GTSE1Q9NYZ3 720 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 CHORDC1Q9UHD1 332 aaPredicted RBP15.48■□□□□ 0.07
SF3B5-201ENST00000367569 NUDT5Q9UKK9 219 aa15.48■□□□□ 0.07
SF3B5-201ENST00000367569 MDM4O15151 490 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 PMM2O15305 246 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 RTN3O95197 1032 aaPredicted RBP15.47■□□□□ 0.07
SF3B5-201ENST00000367569 USP17L7P0C7H9 530 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 IRF1P10914 325 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 ARSAP15289 507 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 DDX6P26196 483 aaKnown RBP eCLIP15.47■□□□□ 0.07
SF3B5-201ENST00000367569 USP8P40818 1118 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 MLLT6P55198 1093 aaPredicted RBP15.47■□□□□ 0.07
SF3B5-201ENST00000367569 USP4Q13107 963 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 GAS6Q14393 721 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 ANO6Q4KMQ2 910 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 MAMSTRQ6ZN01 415 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 GBP6Q6ZN66 633 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 CELF5Q8N6W0 485 aaKnown RBP15.47■□□□□ 0.07
SF3B5-201ENST00000367569 NDRG1Q92597 394 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms