RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 MAK16Q9BXY0 300 aaKnown RBP12.98□□□□□ -0.33
UBA3-202ENST00000361055 UNC93B1Q9H1C4 597 aa12.98□□□□□ -0.33
UBA3-202ENST00000361055 SLCO1B3Q9NPD5 702 aa12.98□□□□□ -0.33
UBA3-202ENST00000361055 PAK6Q9NQU5 681 aaPredicted RBP12.98□□□□□ -0.33
UBA3-202ENST00000361055 SETD4Q9NVD3 440 aa12.98□□□□□ -0.33
UBA3-202ENST00000361055 PCDHGC3Q9UN70 934 aa12.98□□□□□ -0.33
UBA3-202ENST00000361055 C3orf70A6NLC5 250 aaPredicted RBP12.97□□□□□ -0.33
UBA3-202ENST00000361055 C2CD2LO14523 706 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 HNRNPCL1O60812 293 aaKnown RBP12.97□□□□□ -0.33
UBA3-202ENST00000361055 ARL4CP56559 192 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 MXD4Q14582 209 aaPredicted RBP12.97□□□□□ -0.33
UBA3-202ENST00000361055 HIF1AQ16665 826 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 SGSM1Q2NKQ1 1148 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 HP1BP3Q5SSJ5 553 aaPredicted RBP12.97□□□□□ -0.33
UBA3-202ENST00000361055 MARCH8Q5T0T0 291 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 WDR49Q8IV35 697 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 LRRC71Q8N4P6 559 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 WDTC1Q8N5D0 677 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 C7orf31Q8N865 590 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 ARRDC4Q8NCT1 418 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 PYROXD1Q8WU10 500 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 SLC7A6OSQ96CW6 309 aaPredicted RBP12.97□□□□□ -0.33
UBA3-202ENST00000361055 TSEN34Q9BSV6 310 aaKnown RBP12.97□□□□□ -0.33
UBA3-202ENST00000361055 TMEM121Q9BTD3 319 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 KIF9Q9HAQ2 790 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 SAR1AQ9NR31 198 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 LRRD1A4D1F6 860 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 MOXD2PA6NHM9 499 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 CABYRO75952 493 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 KRT4P19013 534 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 NAA25Q14CX7 972 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 TAZQ16635 292 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 WASHC2DQ5SRD0 308 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 TXNRD3NBQ6F5E7 133 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 LVRNQ6Q4G3 990 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 ZPBP2Q6X784 338 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 OTOAQ7RTW8 1153 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 BRSK2Q8IWQ3 736 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 LINC01465Q8N7H1 131 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 NAT8LQ8N9F0 302 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 ATP11CQ8NB49 1132 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 SPOCK2Q92563 424 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 TUBB6Q9BUF5 446 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 VPS11Q9H270 941 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 HAO1Q9UJM8 370 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 STRIP2Q9ULQ0 834 aa12.97□□□□□ -0.33
UBA3-202ENST00000361055 CLUHO75153 1309 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 C17orf102A2RUQ5 167 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 MBLAC1A4D2B0 266 aaPredicted RBP12.96□□□□□ -0.33
UBA3-202ENST00000361055 SIGLEC16A6NMB1 481 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 E7ESA3 106 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 HGSO14964 777 aaPredicted RBP12.96□□□□□ -0.33
UBA3-202ENST00000361055 TM9SF1O15321 606 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 IFNB1P01574 187 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 KRT7P08729 469 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 GNAT1P11488 350 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 CALB2P22676 271 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 HOXC8P31273 242 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 ADAM17P78536 824 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 RNASELQ05823 741 aaKnown RBP12.96□□□□□ -0.33
UBA3-202ENST00000361055 SURF1Q15526 300 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 KLHL38Q2WGJ6 581 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 C3orf62Q6ZUJ4 267 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 BBS12Q6ZW61 710 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 THNSL1Q8IYQ7 743 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 PRPF31Q8WWY3 499 aaKnown RBP12.96□□□□□ -0.33
UBA3-202ENST00000361055 ZNF570Q96NI8 536 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 RNF208Q9H0X6 261 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 ACSS3Q9H6R3 686 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 TLE6Q9H808 572 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 CISHQ9NSE2 258 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 ANKFY1Q9P2R3 1169 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 LRRC42Q9Y546 428 aa12.96□□□□□ -0.33
UBA3-202ENST00000361055 SIP14410 1827 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 CCL5P13501 91 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 GNAZP19086 355 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 POLR2BP30876 1174 aaKnown RBP12.96□□□□□ -0.34
UBA3-202ENST00000361055 CLCN3P51790 818 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 ACLYP53396 1101 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 HADHQ16836 314 aaKnown RBP12.96□□□□□ -0.34
UBA3-202ENST00000361055 DUOXA2Q1HG44 320 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 NBPF20Q3BBV1 942 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 ANKRD20A2Q5SQ80 823 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 ANKRD20A1Q5TYW2 823 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 ANKRD20A3Q5VUR7 823 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 FYB2Q5VWT5 728 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 BZW1Q7L1Q6 419 aaKnown RBP12.96□□□□□ -0.34
UBA3-202ENST00000361055 ZNF276Q8N554 614 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 CFAP61Q8NHU2 1237 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 FNIP1Q8TF40 1166 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 CPT1BQ92523 772 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 ZBTB10Q96DT7 871 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 TBC1D10AQ9BXI6 508 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 NIF3L1Q9GZT8 377 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 RNPEPL1Q9HAU8 725 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 LNPEPQ9UIQ6 1025 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 CEP83Q9Y592 693 aa12.96□□□□□ -0.34
UBA3-202ENST00000361055 TROVE2P10155 538 aaKnown RBP eCLIP12.95□□□□□ -0.34
UBA3-202ENST00000361055 BRD2P25440 801 aaKnown RBP12.95□□□□□ -0.34
UBA3-202ENST00000361055 TARSP26639 723 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms