RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ZC3H11AO75152 810 aaKnown RBP eCLIP10.56□□□□□ -0.721e-7■■□□□ 11.9
PTPRA-203ENST00000356147 ENTPD3O75355 529 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 LYPLA2O95372 231 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 MMP10P09238 476 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 SPDYE6P0CI01 402 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 KRT3P12035 628 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 GARTP22102 1010 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 KDELR1P24390 212 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 ATP5OP48047 213 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 SPDYE2Q495Y8 402 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 TCHHL1Q5QJ38 904 aaPredicted RBP10.56□□□□□ -0.72
PTPRA-203ENST00000356147 TRIM72Q6ZMU5 477 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 RASSF3Q86WH2 238 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 NETO2Q8NC67 525 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 SLC44A1Q8WWI5 657 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 EZH1Q92800 747 aaPredicted RBP10.56□□□□□ -0.72
PTPRA-203ENST00000356147 TIPINQ9BVW5 301 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 ACSS2Q9NR19 701 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 ANKEF1Q9NU02 776 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 FEM1BQ9UK73 627 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 YDJCA8MPS7 323 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 K7ERI5 159 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 DNAJC6O75061 913 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 APRTP07741 180 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 GRIA2P42262 883 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 ATXN3P54252 364 aaPredicted RBP10.56□□□□□ -0.72
PTPRA-203ENST00000356147 PSMC1P62191 440 aaKnown RBP10.56□□□□□ -0.72
PTPRA-203ENST00000356147 SNRPFP62306 86 aaKnown RBP10.56□□□□□ -0.72
PTPRA-203ENST00000356147 TFAMQ00059 246 aaKnown RBP10.56□□□□□ -0.72
PTPRA-203ENST00000356147 VWA5B1Q5TIE3 1220 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 SH2D5Q6ZV89 423 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 TMEM35BQ8NCS4 154 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 PPP1R14CQ8TAE6 165 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 TMEM174Q8WUU8 243 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 VCPIP1Q96JH7 1222 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 DNAJC1Q96KC8 554 aaKnown RBP10.56□□□□□ -0.72
PTPRA-203ENST00000356147 CLIC5Q9NZA1 410 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 CNTN3Q9P232 1028 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 POLIQ9UNA4 740 aa10.56□□□□□ -0.72
PTPRA-203ENST00000356147 RPL26L1Q9UNX3 145 aaKnown RBP10.56□□□□□ -0.72
PTPRA-203ENST00000356147 CAPN14A8MX76 684 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 ITM2AO43736 263 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 CD1EP15812 388 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 PEX2P28328 305 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 ALDH1B1P30837 517 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 AQP4P55087 323 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 SLC25A11Q02978 314 aaKnown RBP10.55□□□□□ -0.72
PTPRA-203ENST00000356147 KRT72Q14CN4 511 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 FAM160B2Q86V87 743 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 NDUFAF2Q8N183 169 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTPRA-203ENST00000356147 AGR3Q8TD06 166 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 ALKBH8Q96BT7 664 aaKnown RBP10.55□□□□□ -0.72
PTPRA-203ENST00000356147 NTPCRQ9BSD7 190 aaKnown RBP10.55□□□□□ -0.72
PTPRA-203ENST00000356147 IMPG2Q9BZV3 1241 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 CYP26B1Q9NR63 512 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 IL1RAPL1Q9NZN1 696 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 CTDP1Q9Y5B0 961 aaPredicted RBP10.55□□□□□ -0.72
PTPRA-203ENST00000356147 SLX4Q8IY92 1834 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 MYOCOSA0A1B0GUC4 107 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 MCF2LO15068 1137 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 TM7SF2O76062 418 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 GSTA2P09210 222 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 CSH1P0DML2 217 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 CSH2P0DML3 217 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 MSX2P35548 267 aaPredicted RBP10.55□□□□□ -0.72
PTPRA-203ENST00000356147 PTGER2P43116 358 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 JAK3P52333 1124 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 ACTR3P61158 418 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 RPL10AP62906 217 aaKnown RBP10.55□□□□□ -0.72
PTPRA-203ENST00000356147 AP2B1P63010 937 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 ASPHQ12797 758 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 DLG1Q12959 904 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 DLGAP5Q15398 846 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 C6orf163Q5TEZ5 329 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 PCGF5Q86SE9 256 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 SATL1Q86VE3 508 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 ARHGAP24Q8N264 748 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 MPP5Q8N3R9 675 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 DEPTORQ8TB45 409 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 PGLYRP2Q96PD5 576 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 NDNQ99608 321 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 PXMP2Q9NR77 195 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 ARHGAP28Q9P2N2 729 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 HERC5Q9UII4 1024 aaKnown RBP10.55□□□□□ -0.72
PTPRA-203ENST00000356147 PLA2G4CQ9UP65 541 aa10.55□□□□□ -0.72
PTPRA-203ENST00000356147 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.54□□□□□ -0.72
PTPRA-203ENST00000356147 TCRBV5S1A1TA0A578 114 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 IRF6O14896 467 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 KCNN4O15554 427 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 CALB1P05937 261 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 KRT19P08727 400 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 MIPP30301 263 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 GRIA1P42261 906 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 CRADDP78560 199 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 KRT76Q01546 638 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 PIGHQ14442 188 aaPredicted RBP10.54□□□□□ -0.72
PTPRA-203ENST00000356147 PPP6R3Q5H9R7 873 aaPredicted RBP10.54□□□□□ -0.72
PTPRA-203ENST00000356147 MYLK4Q86YV6 388 aaPredicted RBP10.54□□□□□ -0.72
PTPRA-203ENST00000356147 PPP1R36Q96LQ0 422 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms